RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
PRKCH-203ENST00000552875 MYOM1P52179 1685 aa13.47□□□□□ -0.25
PRKCH-203ENST00000552875 CAPN15O75808 1086 aa13.47□□□□□ -0.25
PRKCH-203ENST00000552875 APLP2Q06481 763 aa13.47□□□□□ -0.25
PRKCH-203ENST00000552875 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
PRKCH-203ENST00000552875 ARXQ96QS3 562 aa13.47□□□□□ -0.25
PRKCH-203ENST00000552875 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
PRKCH-203ENST00000552875 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
PRKCH-203ENST00000552875 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
PRKCH-203ENST00000552875 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
PRKCH-203ENST00000552875 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
PRKCH-203ENST00000552875 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
PRKCH-203ENST00000552875 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-203ENST00000552875 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
PRKCH-203ENST00000552875 SLC34A2O95436 690 aa13.44□□□□□ -0.26
PRKCH-203ENST00000552875 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
PRKCH-203ENST00000552875 PDGFDQ9GZP0 370 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-203ENST00000552875 GPBP1L1Q9HC44 474 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-203ENST00000552875 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
PRKCH-203ENST00000552875 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
PRKCH-203ENST00000552875 PRELPP51888 382 aa13.43□□□□□ -0.26
PRKCH-203ENST00000552875 EVA1CP58658 441 aa13.43□□□□□ -0.26
PRKCH-203ENST00000552875 STK26Q9P289 416 aa13.43□□□□□ -0.26
PRKCH-203ENST00000552875 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
PRKCH-203ENST00000552875 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
PRKCH-203ENST00000552875 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
PRKCH-203ENST00000552875 TECPR2O15040 1411 aa13.41□□□□□ -0.26
PRKCH-203ENST00000552875 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
PRKCH-203ENST00000552875 APLP1P51693 650 aa13.4□□□□□ -0.26
PRKCH-203ENST00000552875 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
PRKCH-203ENST00000552875 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
PRKCH-203ENST00000552875 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
PRKCH-203ENST00000552875 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
PRKCH-203ENST00000552875 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
PRKCH-203ENST00000552875 TNS4Q8IZW8 715 aa13.39□□□□□ -0.27
PRKCH-203ENST00000552875 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
PRKCH-203ENST00000552875 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
PRKCH-203ENST00000552875 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
PRKCH-203ENST00000552875 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
PRKCH-203ENST00000552875 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
PRKCH-203ENST00000552875 ABCC11Q96J66 1382 aa13.38□□□□□ -0.27
PRKCH-203ENST00000552875 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
PRKCH-203ENST00000552875 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
PRKCH-203ENST00000552875 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
PRKCH-203ENST00000552875 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
PRKCH-203ENST00000552875 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
PRKCH-203ENST00000552875 KIAA0232Q92628 1395 aa13.36□□□□□ -0.27
PRKCH-203ENST00000552875 COL13A1Q5TAT6 717 aaPredicted RBP13.36□□□□□ -0.27
PRKCH-203ENST00000552875 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
PRKCH-203ENST00000552875 PLEKHH1Q9ULM0 1364 aa13.35□□□□□ -0.27
PRKCH-203ENST00000552875 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
PRKCH-203ENST00000552875 POLD1P28340 1107 aa13.35□□□□□ -0.27
PRKCH-203ENST00000552875 CHRNA2Q15822 529 aa13.35□□□□□ -0.27
PRKCH-203ENST00000552875 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
PRKCH-203ENST00000552875 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
PRKCH-203ENST00000552875 CLTCL1P53675 1640 aa13.34□□□□□ -0.27
PRKCH-203ENST00000552875 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
PRKCH-203ENST00000552875 PROM2Q8N271 834 aa13.33□□□□□ -0.28
PRKCH-203ENST00000552875 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
PRKCH-203ENST00000552875 KIF1BO60333 1816 aa13.32□□□□□ -0.28
PRKCH-203ENST00000552875 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
PRKCH-203ENST00000552875 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
PRKCH-203ENST00000552875 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
PRKCH-203ENST00000552875 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
PRKCH-203ENST00000552875 DDB1Q16531 1140 aa13.3□□□□□ -0.28
PRKCH-203ENST00000552875 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
PRKCH-203ENST00000552875 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
PRKCH-203ENST00000552875 DNAJC5GQ8N7S2 189 aa13.29□□□□□ -0.28
PRKCH-203ENST00000552875 NGDNQ8NEJ9 315 aaKnown RBP13.29□□□□□ -0.28
PRKCH-203ENST00000552875 SLC16A10Q8TF71 515 aa13.29□□□□□ -0.28
PRKCH-203ENST00000552875 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
PRKCH-203ENST00000552875 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
PRKCH-203ENST00000552875 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
PRKCH-203ENST00000552875 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
PRKCH-203ENST00000552875 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
PRKCH-203ENST00000552875 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-203ENST00000552875 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
PRKCH-203ENST00000552875 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
PRKCH-203ENST00000552875 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
PRKCH-203ENST00000552875 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRKCH-203ENST00000552875 ATP7BP35670 1465 aa13.24□□□□□ -0.29
PRKCH-203ENST00000552875 BCL9O00512 1426 aa13.24□□□□□ -0.29
PRKCH-203ENST00000552875 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
PRKCH-203ENST00000552875 POGKQ9P215 609 aa13.24□□□□□ -0.29
PRKCH-203ENST00000552875 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
PRKCH-203ENST00000552875 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
PRKCH-203ENST00000552875 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRKCH-203ENST00000552875 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
PRKCH-203ENST00000552875 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
PRKCH-203ENST00000552875 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
PRKCH-203ENST00000552875 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
PRKCH-203ENST00000552875 ADCY9O60503 1353 aa13.22□□□□□ -0.29
PRKCH-203ENST00000552875 TOMM70O94826 608 aa13.22□□□□□ -0.29
PRKCH-203ENST00000552875 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
PRKCH-203ENST00000552875 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
PRKCH-203ENST00000552875 CRB1P82279 1406 aa13.22□□□□□ -0.29
PRKCH-203ENST00000552875 KIF3CO14782 793 aa13.21□□□□□ -0.29
PRKCH-203ENST00000552875 PPLO60437 1756 aa13.21□□□□□ -0.29
PRKCH-203ENST00000552875 PEAK1Q9H792 1746 aa13.21□□□□□ -0.3
PRKCH-203ENST00000552875 CPDO75976 1380 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms