RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 POTEIP0CG38 1075 aa9.42□□□□□ -0.9
RFX4-211ENST00000552866 LYPD8Q6UX82 237 aa9.42□□□□□ -0.9
RFX4-211ENST00000552866 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
RFX4-211ENST00000552866 CRTC2Q53ET0 693 aaPredicted RBP9.41□□□□□ -0.9
RFX4-211ENST00000552866 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
RFX4-211ENST00000552866 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
RFX4-211ENST00000552866 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
RFX4-211ENST00000552866 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
RFX4-211ENST00000552866 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
RFX4-211ENST00000552866 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
RFX4-211ENST00000552866 PTK7Q13308 1070 aa9.4□□□□□ -0.9
RFX4-211ENST00000552866 Q3C1V9 767 aa9.4□□□□□ -0.9
RFX4-211ENST00000552866 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
RFX4-211ENST00000552866 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
RFX4-211ENST00000552866 ATP5J2-PTCD1G3V325 749 aa9.39□□□□□ -0.91
RFX4-211ENST00000552866 ZNF16P17020 682 aaPredicted RBP9.39□□□□□ -0.91
RFX4-211ENST00000552866 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
RFX4-211ENST00000552866 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
RFX4-211ENST00000552866 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
RFX4-211ENST00000552866 FAM98CQ17RN3 349 aaKnown RBP9.38□□□□□ -0.91
RFX4-211ENST00000552866 KMT5BQ4FZB7 885 aa9.38□□□□□ -0.91
RFX4-211ENST00000552866 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
RFX4-211ENST00000552866 MORN1Q5T089 497 aa9.38□□□□□ -0.91
RFX4-211ENST00000552866 DEPDC4Q8N2C3 294 aa9.38□□□□□ -0.91
RFX4-211ENST00000552866 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
RFX4-211ENST00000552866 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
RFX4-211ENST00000552866 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
RFX4-211ENST00000552866 RASA1P20936 1047 aa9.37□□□□□ -0.91
RFX4-211ENST00000552866 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
RFX4-211ENST00000552866 SERPINB4P48594 390 aa9.37□□□□□ -0.91
RFX4-211ENST00000552866 MARSP56192 900 aaKnown RBP9.37□□□□□ -0.91
RFX4-211ENST00000552866 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
RFX4-211ENST00000552866 NCOA4Q13772 614 aa9.36□□□□□ -0.91
RFX4-211ENST00000552866 ANKMY2Q8IV38 441 aa9.36□□□□□ -0.91
RFX4-211ENST00000552866 F12P00748 615 aaPredicted RBP9.35□□□□□ -0.91
RFX4-211ENST00000552866 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
RFX4-211ENST00000552866 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
RFX4-211ENST00000552866 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
RFX4-211ENST00000552866 C1orf216Q8TAB5 229 aa9.35□□□□□ -0.91
RFX4-211ENST00000552866 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
RFX4-211ENST00000552866 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
RFX4-211ENST00000552866 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
RFX4-211ENST00000552866 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
RFX4-211ENST00000552866 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 PLPP7Q8NBV4 271 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 GIPC2Q8TF65 315 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
RFX4-211ENST00000552866 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
RFX4-211ENST00000552866 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
RFX4-211ENST00000552866 RNF40O75150 1001 aa9.32□□□□□ -0.92
RFX4-211ENST00000552866 TCF3P15923 654 aa9.32□□□□□ -0.92
RFX4-211ENST00000552866 DPYDQ12882 1025 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 PTPRNQ16849 979 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
RFX4-211ENST00000552866 MAP10Q9P2G4 905 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
RFX4-211ENST00000552866 ANKRD33BA6NCL7 494 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 VAMP1P23763 118 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 PSEN2P49810 448 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 EML3Q32P44 896 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 PUS10Q3MIT2 529 aaKnown RBP9.3□□□□□ -0.92
RFX4-211ENST00000552866 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 TRIM50Q86XT4 487 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 EGFL7Q9UHF1 273 aa9.3□□□□□ -0.92
RFX4-211ENST00000552866 HSP90B1P14625 803 aaKnown RBP9.29□□□□□ -0.92
RFX4-211ENST00000552866 ZNF326Q5BKZ1 582 aaKnown RBP9.29□□□□□ -0.92
RFX4-211ENST00000552866 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
RFX4-211ENST00000552866 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
RFX4-211ENST00000552866 ATP1A2P50993 1020 aa9.28□□□□□ -0.92
RFX4-211ENST00000552866 PTK2Q05397 1052 aa9.28□□□□□ -0.92
RFX4-211ENST00000552866 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
RFX4-211ENST00000552866 PUS7Q96PZ0 661 aaKnown RBP9.28□□□□□ -0.92
RFX4-211ENST00000552866 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 JUNDP17535 347 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 CLDN10P78369 228 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 TRAF7Q6Q0C0 670 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
RFX4-211ENST00000552866 C8orf37Q96NL8 207 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 PRR14Q9BWN1 585 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 DNAAF2Q9NVR5 837 aaKnown RBP9.27□□□□□ -0.93
RFX4-211ENST00000552866 PCDHB9Q9Y5E1 797 aa9.27□□□□□ -0.93
RFX4-211ENST00000552866 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
RFX4-211ENST00000552866 SIX5Q8N196 739 aa9.26□□□□□ -0.93
RFX4-211ENST00000552866 LARGE2Q8N3Y3 721 aa9.26□□□□□ -0.93
RFX4-211ENST00000552866 ARMC2Q8NEN0 867 aa9.26□□□□□ -0.93
RFX4-211ENST00000552866 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
RFX4-211ENST00000552866 SCNN1AP37088 669 aa9.25□□□□□ -0.93
RFX4-211ENST00000552866 TAS1R3Q7RTX0 852 aa9.25□□□□□ -0.93
RFX4-211ENST00000552866 NBPF3Q9H094 633 aa9.25□□□□□ -0.93
RFX4-211ENST00000552866 CXXC1Q9P0U4 656 aaPredicted RBP9.25□□□□□ -0.93
RFX4-211ENST00000552866 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
RFX4-211ENST00000552866 SNPHO15079 494 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms