RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
RFX4-211ENST00000552866 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
RFX4-211ENST00000552866 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
RFX4-211ENST00000552866 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
RFX4-211ENST00000552866 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
RFX4-211ENST00000552866 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
RFX4-211ENST00000552866 ADRA2BP18089 450 aa15.81■□□□□ 0.12
RFX4-211ENST00000552866 KCNA4P22459 653 aa15.79■□□□□ 0.12
RFX4-211ENST00000552866 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
RFX4-211ENST00000552866 FOXD1Q16676 465 aa15.4■□□□□ 0.06
RFX4-211ENST00000552866 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
RFX4-211ENST00000552866 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
RFX4-211ENST00000552866 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
RFX4-211ENST00000552866 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
RFX4-211ENST00000552866 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
RFX4-211ENST00000552866 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
RFX4-211ENST00000552866 ZBTB22O15209 634 aa14.55□□□□□ -0.08
RFX4-211ENST00000552866 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
RFX4-211ENST00000552866 SLC24A1O60721 1099 aa14.39□□□□□ -0.11
RFX4-211ENST00000552866 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
RFX4-211ENST00000552866 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
RFX4-211ENST00000552866 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
RFX4-211ENST00000552866 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
RFX4-211ENST00000552866 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
RFX4-211ENST00000552866 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
RFX4-211ENST00000552866 MSH5O43196 834 aa13.86□□□□□ -0.19
RFX4-211ENST00000552866 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
RFX4-211ENST00000552866 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
RFX4-211ENST00000552866 FKBP8Q14318 412 aa13.71□□□□□ -0.21
RFX4-211ENST00000552866 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
RFX4-211ENST00000552866 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
RFX4-211ENST00000552866 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
RFX4-211ENST00000552866 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
RFX4-211ENST00000552866 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
RFX4-211ENST00000552866 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
RFX4-211ENST00000552866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
RFX4-211ENST00000552866 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
RFX4-211ENST00000552866 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
RFX4-211ENST00000552866 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
RFX4-211ENST00000552866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
RFX4-211ENST00000552866 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
RFX4-211ENST00000552866 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
RFX4-211ENST00000552866 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
RFX4-211ENST00000552866 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
RFX4-211ENST00000552866 BCANQ96GW7 911 aa12.81□□□□□ -0.36
RFX4-211ENST00000552866 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
RFX4-211ENST00000552866 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
RFX4-211ENST00000552866 PROM2Q8N271 834 aa12.77□□□□□ -0.37
RFX4-211ENST00000552866 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
RFX4-211ENST00000552866 APLP2Q06481 763 aa12.7□□□□□ -0.38
RFX4-211ENST00000552866 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
RFX4-211ENST00000552866 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
RFX4-211ENST00000552866 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
RFX4-211ENST00000552866 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
RFX4-211ENST00000552866 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
RFX4-211ENST00000552866 PKD2Q13563 968 aa12.62□□□□□ -0.39
RFX4-211ENST00000552866 FBLN2P98095 1184 aa12.54□□□□□ -0.4
RFX4-211ENST00000552866 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
RFX4-211ENST00000552866 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
RFX4-211ENST00000552866 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
RFX4-211ENST00000552866 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
RFX4-211ENST00000552866 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
RFX4-211ENST00000552866 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
RFX4-211ENST00000552866 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
RFX4-211ENST00000552866 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
RFX4-211ENST00000552866 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
RFX4-211ENST00000552866 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
RFX4-211ENST00000552866 POLA2Q14181 598 aa12.29□□□□□ -0.44
RFX4-211ENST00000552866 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
RFX4-211ENST00000552866 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
RFX4-211ENST00000552866 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
RFX4-211ENST00000552866 RGL2O15211 777 aa12.21□□□□□ -0.45
RFX4-211ENST00000552866 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
RFX4-211ENST00000552866 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
RFX4-211ENST00000552866 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
RFX4-211ENST00000552866 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
RFX4-211ENST00000552866 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
RFX4-211ENST00000552866 CAPN15O75808 1086 aa12.1□□□□□ -0.47
RFX4-211ENST00000552866 NBR1Q14596 966 aa12.09□□□□□ -0.47
RFX4-211ENST00000552866 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
RFX4-211ENST00000552866 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
RFX4-211ENST00000552866 MIER1Q8N108 512 aa12□□□□□ -0.49
RFX4-211ENST00000552866 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
RFX4-211ENST00000552866 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
RFX4-211ENST00000552866 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
RFX4-211ENST00000552866 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
RFX4-211ENST00000552866 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
RFX4-211ENST00000552866 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
RFX4-211ENST00000552866 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
RFX4-211ENST00000552866 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
RFX4-211ENST00000552866 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
RFX4-211ENST00000552866 ABCB7O75027 752 aa11.95□□□□□ -0.5
RFX4-211ENST00000552866 TIMELESSQ9UNS1 1208 aa11.95□□□□□ -0.5
RFX4-211ENST00000552866 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
RFX4-211ENST00000552866 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
RFX4-211ENST00000552866 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
RFX4-211ENST00000552866 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
RFX4-211ENST00000552866 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
RFX4-211ENST00000552866 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
RFX4-211ENST00000552866 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms