RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 CCNYL3P0C7X3 344 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 FKBPLQ9UIM3 349 aa9.54□□□□□ -0.88
AC087897.2-201ENST00000552639 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
AC087897.2-201ENST00000552639 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
AC087897.2-201ENST00000552639 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
AC087897.2-201ENST00000552639 TLL1O43897 1013 aa9.52□□□□□ -0.89
AC087897.2-201ENST00000552639 CTHP32929 405 aa9.52□□□□□ -0.89
AC087897.2-201ENST00000552639 SOX11P35716 441 aa9.52□□□□□ -0.89
AC087897.2-201ENST00000552639 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
AC087897.2-201ENST00000552639 KCNH2Q12809 1159 aa9.51□□□□□ -0.89
AC087897.2-201ENST00000552639 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
AC087897.2-201ENST00000552639 ADAMTS19Q8TE59 1207 aa9.5□□□□□ -0.89
AC087897.2-201ENST00000552639 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
AC087897.2-201ENST00000552639 ALG2Q9H553 416 aa9.5□□□□□ -0.89
AC087897.2-201ENST00000552639 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
AC087897.2-201ENST00000552639 NR1H3Q13133 447 aa9.49□□□□□ -0.89
AC087897.2-201ENST00000552639 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
AC087897.2-201ENST00000552639 ZBBXA8MT70 800 aa9.48□□□□□ -0.89
AC087897.2-201ENST00000552639 GPKOWQ92917 476 aaPredicted RBP eCLIP9.48□□□□□ -0.89
AC087897.2-201ENST00000552639 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
AC087897.2-201ENST00000552639 SEMA3FQ13275 785 aa9.47□□□□□ -0.89
AC087897.2-201ENST00000552639 NBPF14Q5TI25 921 aa9.46□□□□□ -0.9
AC087897.2-201ENST00000552639 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
AC087897.2-201ENST00000552639 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
AC087897.2-201ENST00000552639 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
AC087897.2-201ENST00000552639 PTK2Q05397 1052 aa9.44□□□□□ -0.9
AC087897.2-201ENST00000552639 NKX2-3Q8TAU0 364 aa9.44□□□□□ -0.9
AC087897.2-201ENST00000552639 UNC93B1Q9H1C4 597 aa9.44□□□□□ -0.9
AC087897.2-201ENST00000552639 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
AC087897.2-201ENST00000552639 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
AC087897.2-201ENST00000552639 S1PR4O95977 384 aa9.42□□□□□ -0.9
AC087897.2-201ENST00000552639 PTCRAQ6ISU1 281 aaPredicted RBP9.42□□□□□ -0.9
AC087897.2-201ENST00000552639 ZNF592Q92610 1267 aa9.42□□□□□ -0.9
AC087897.2-201ENST00000552639 KCNC4Q03721 635 aa9.41□□□□□ -0.9
AC087897.2-201ENST00000552639 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
AC087897.2-201ENST00000552639 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
AC087897.2-201ENST00000552639 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.9
AC087897.2-201ENST00000552639 FCF1Q9Y324 198 aaKnown RBP9.4□□□□□ -0.9
AC087897.2-201ENST00000552639 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
AC087897.2-201ENST00000552639 Q6ZNB5 142 aa9.39□□□□□ -0.91
AC087897.2-201ENST00000552639 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
AC087897.2-201ENST00000552639 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
AC087897.2-201ENST00000552639 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
AC087897.2-201ENST00000552639 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
AC087897.2-201ENST00000552639 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
AC087897.2-201ENST00000552639 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
AC087897.2-201ENST00000552639 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
AC087897.2-201ENST00000552639 LCE2BO14633 110 aa9.37□□□□□ -0.91
AC087897.2-201ENST00000552639 RFX1P22670 979 aa9.36□□□□□ -0.91
AC087897.2-201ENST00000552639 NFATC2IPQ8NCF5 419 aa9.36□□□□□ -0.91
AC087897.2-201ENST00000552639 BAP1Q92560 729 aa9.36□□□□□ -0.91
AC087897.2-201ENST00000552639 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 GGCXP38435 758 aa9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
AC087897.2-201ENST00000552639 ATP9BO43861 1147 aa9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 BPHLQ86WA6 291 aaPredicted RBP9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 ZNF511Q8NB15 262 aa9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 CEP126Q9P2H0 1117 aa9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 PCDHB9Q9Y5E1 797 aa9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
AC087897.2-201ENST00000552639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.33□□□□□ -0.92
AC087897.2-201ENST00000552639 ANKLE1Q8NAG6 615 aa9.33□□□□□ -0.92
AC087897.2-201ENST00000552639 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
AC087897.2-201ENST00000552639 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
AC087897.2-201ENST00000552639 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 AGERQ15109 404 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 FOXJ1Q92949 421 aa9.31□□□□□ -0.92
AC087897.2-201ENST00000552639 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
AC087897.2-201ENST00000552639 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
AC087897.2-201ENST00000552639 SKIP12755 728 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 SH3BP2P78314 561 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 PDE4CQ08493 712 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 TRAIPQ9BWF2 469 aa9.29□□□□□ -0.92
AC087897.2-201ENST00000552639 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
AC087897.2-201ENST00000552639 PPP1R18Q6NYC8 613 aa9.28□□□□□ -0.92
AC087897.2-201ENST00000552639 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
AC087897.2-201ENST00000552639 FAM174AQ8TBP5 190 aa9.28□□□□□ -0.92
AC087897.2-201ENST00000552639 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
AC087897.2-201ENST00000552639 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
AC087897.2-201ENST00000552639 LZTS3O60299 673 aaPredicted RBP9.27□□□□□ -0.93
AC087897.2-201ENST00000552639 TRIM32Q13049 653 aa9.27□□□□□ -0.93
AC087897.2-201ENST00000552639 C1QTNF2Q9BXJ5 285 aa9.27□□□□□ -0.93
AC087897.2-201ENST00000552639 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms