RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 MINK1Q8N4C8 1332 aaPredicted RBP24.12■■□□□ 1.45
RAB5C-209ENST00000552162 PRR36Q9H6K5 1346 aa24.12■■□□□ 1.45
RAB5C-209ENST00000552162 THSD7AQ9UPZ6 1657 aa24.1■■□□□ 1.45
RAB5C-209ENST00000552162 PSDA5PKW4 1024 aaPredicted RBP24.09■■□□□ 1.45
RAB5C-209ENST00000552162 ITSN1Q15811 1721 aa24.08■■□□□ 1.45
RAB5C-209ENST00000552162 SPATA31A5Q5VU36 1347 aa24.08■■□□□ 1.44
RAB5C-209ENST00000552162 SPATA31A7Q8IWB4 1347 aa24.08■■□□□ 1.44
RAB5C-209ENST00000552162 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
RAB5C-209ENST00000552162 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
RAB5C-209ENST00000552162 TNS1Q9HBL0 1735 aaKnown RBP24.07■■□□□ 1.44
RAB5C-209ENST00000552162 NGDNQ8NEJ9 315 aaKnown RBP24.06■■□□□ 1.44
RAB5C-209ENST00000552162 ARHGEF28Q8N1W1 1705 aaKnown RBP24.05■■□□□ 1.44
RAB5C-209ENST00000552162 HRCP23327 699 aa24.05■■□□□ 1.44
RAB5C-209ENST00000552162 FAM182BQ5T319 152 aa24.05■■□□□ 1.44
RAB5C-209ENST00000552162 PHRF1Q9P1Y6 1649 aaKnown RBP24.04■■□□□ 1.44
RAB5C-209ENST00000552162 PAK3O75914 559 aaPredicted RBP24.04■■□□□ 1.44
RAB5C-209ENST00000552162 PRDM11Q9NQV5 511 aa24.04■■□□□ 1.44
RAB5C-209ENST00000552162 KDM2AQ9Y2K7 1162 aa24.04■■□□□ 1.44
RAB5C-209ENST00000552162 ATP7BP35670 1465 aa24.03■■□□□ 1.44
RAB5C-209ENST00000552162 EN1Q05925 392 aaPredicted RBP24.03■■□□□ 1.44
RAB5C-209ENST00000552162 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
RAB5C-209ENST00000552162 DISP2A7MBM2 1401 aa24.02■■□□□ 1.44
RAB5C-209ENST00000552162 KIAA0232Q92628 1395 aa24■■□□□ 1.43
RAB5C-209ENST00000552162 SPATA31A1Q5TZJ5 1347 aa23.98■■□□□ 1.43
RAB5C-209ENST00000552162 TOPAZ1Q8N9V7 1692 aa23.97■■□□□ 1.43
RAB5C-209ENST00000552162 R3HDM1Q15032 1099 aaKnown RBP23.96■■□□□ 1.43
RAB5C-209ENST00000552162 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
RAB5C-209ENST00000552162 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
RAB5C-209ENST00000552162 CHRNA2Q15822 529 aa23.95■■□□□ 1.42
RAB5C-209ENST00000552162 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
RAB5C-209ENST00000552162 EZH2Q15910 746 aaKnown RBP23.93■■□□□ 1.42
RAB5C-209ENST00000552162 NRKQ7Z2Y5 1582 aa23.92■■□□□ 1.42
RAB5C-209ENST00000552162 TRIM37O94972 964 aa23.91■■□□□ 1.42
RAB5C-209ENST00000552162 ZC3H6P61129 1189 aaKnown RBP23.91■■□□□ 1.42
RAB5C-209ENST00000552162 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
RAB5C-209ENST00000552162 FAM196AQ6ZSG2 479 aa23.91■■□□□ 1.42
RAB5C-209ENST00000552162 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
RAB5C-209ENST00000552162 CAMKK2Q96RR4 588 aa23.89■■□□□ 1.41
RAB5C-209ENST00000552162 CDK19Q9BWU1 502 aa23.89■■□□□ 1.41
RAB5C-209ENST00000552162 USP35Q9P2H5 1018 aa23.89■■□□□ 1.41
RAB5C-209ENST00000552162 SSH2Q76I76 1423 aa23.89■■□□□ 1.41
RAB5C-209ENST00000552162 RREB1Q92766 1687 aa23.89■■□□□ 1.41
RAB5C-209ENST00000552162 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
RAB5C-209ENST00000552162 ACEP12821 1306 aa23.87■■□□□ 1.41
RAB5C-209ENST00000552162 LMO7Q8WWI1 1683 aa23.87■■□□□ 1.41
RAB5C-209ENST00000552162 APBA3O96018 575 aa23.86■■□□□ 1.41
RAB5C-209ENST00000552162 KIAA1210Q9ULL0 1709 aa23.86■■□□□ 1.41
RAB5C-209ENST00000552162 CAMTA1Q9Y6Y1 1673 aa23.86■■□□□ 1.41
RAB5C-209ENST00000552162 NUP188Q5SRE5 1749 aa23.85■■□□□ 1.41
RAB5C-209ENST00000552162 EVA1CP58658 441 aa23.85■■□□□ 1.41
RAB5C-209ENST00000552162 NBPF8Q3BBV2 869 aa23.85■■□□□ 1.41
RAB5C-209ENST00000552162 BARGINQ6ZT62 677 aa23.85■■□□□ 1.41
RAB5C-209ENST00000552162 CCDC61Q9Y6R9 512 aa23.84■■□□□ 1.41
RAB5C-209ENST00000552162 CPDO75976 1380 aa23.83■■□□□ 1.41
RAB5C-209ENST00000552162 PDE3BQ13370 1112 aa23.83■■□□□ 1.41
RAB5C-209ENST00000552162 PLEKHG3A1L390 1219 aa23.82■■□□□ 1.4
RAB5C-209ENST00000552162 LARP1Q6PKG0 1096 aaKnown RBP23.82■■□□□ 1.4
RAB5C-209ENST00000552162 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
RAB5C-209ENST00000552162 USP19O94966 1318 aa23.82■■□□□ 1.4
RAB5C-209ENST00000552162 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
RAB5C-209ENST00000552162 PARP4Q9UKK3 1724 aaKnown RBP23.8■■□□□ 1.4
RAB5C-209ENST00000552162 PPIP5K1Q6PFW1 1433 aa23.77■■□□□ 1.4
RAB5C-209ENST00000552162 COL5A2P05997 1499 aaPredicted RBP23.77■■□□□ 1.4
RAB5C-209ENST00000552162 THRAP3Q9Y2W1 955 aaKnown RBP23.76■■□□□ 1.39
RAB5C-209ENST00000552162 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
RAB5C-209ENST00000552162 GCP02774 474 aa23.74■■□□□ 1.39
RAB5C-209ENST00000552162 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
RAB5C-209ENST00000552162 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
RAB5C-209ENST00000552162 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
RAB5C-209ENST00000552162 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
RAB5C-209ENST00000552162 CRB1P82279 1406 aa23.72■■□□□ 1.39
RAB5C-209ENST00000552162 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
RAB5C-209ENST00000552162 LRRC37A3O60309 1634 aa23.71■■□□□ 1.39
RAB5C-209ENST00000552162 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.39
RAB5C-209ENST00000552162 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.39
RAB5C-209ENST00000552162 OVOS2A0A0G2JMS6 1433 aa23.7■■□□□ 1.38
RAB5C-209ENST00000552162 OVOS2A0A0J9YW53 1432 aa23.7■■□□□ 1.38
RAB5C-209ENST00000552162 OVOS2Q6IE36 1432 aa23.7■■□□□ 1.38
RAB5C-209ENST00000552162 BRD4O60885 1362 aaPredicted RBP23.7■■□□□ 1.38
RAB5C-209ENST00000552162 CENPJQ9HC77 1338 aaPredicted RBP23.7■■□□□ 1.38
RAB5C-209ENST00000552162 SLIT3O75094 1523 aa23.69■■□□□ 1.38
RAB5C-209ENST00000552162 CABP2Q9NPB3 220 aa23.69■■□□□ 1.38
RAB5C-209ENST00000552162 USP6P35125 1406 aa23.68■■□□□ 1.38
RAB5C-209ENST00000552162 SBF2Q86WG5 1849 aa23.68■■□□□ 1.38
RAB5C-209ENST00000552162 ZBTB7CA1YPR0 619 aa23.68■■□□□ 1.38
RAB5C-209ENST00000552162 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
RAB5C-209ENST00000552162 WNK3Q9BYP7 1800 aa23.68■■□□□ 1.38
RAB5C-209ENST00000552162 PIK3C2AO00443 1686 aa23.66■■□□□ 1.38
RAB5C-209ENST00000552162 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
RAB5C-209ENST00000552162 NLRP6P59044 892 aa23.64■■□□□ 1.37
RAB5C-209ENST00000552162 SPON1Q9HCB6 807 aa23.64■■□□□ 1.37
RAB5C-209ENST00000552162 COL18A1P39060 1754 aa23.64■■□□□ 1.37
RAB5C-209ENST00000552162 CABP1Q9NZU7 370 aa23.63■■□□□ 1.37
RAB5C-209ENST00000552162 PPP1R1BQ9UD71 204 aaPredicted RBP23.63■■□□□ 1.37
RAB5C-209ENST00000552162 KCNQ2O43526 872 aa23.62■■□□□ 1.37
RAB5C-209ENST00000552162 AKAP12Q02952 1782 aa23.61■■□□□ 1.37
RAB5C-209ENST00000552162 YY1P25490 414 aa23.61■■□□□ 1.37
RAB5C-209ENST00000552162 DDB1Q16531 1140 aa23.61■■□□□ 1.37
RAB5C-209ENST00000552162 TOM1L2Q6ZVM7 507 aa23.61■■□□□ 1.37
RAB5C-209ENST00000552162 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms