RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 SPATA31A5Q5VU36 1347 aa31.94■■■□□ 2.7
SMARCD1-212ENST00000551966 SPATA31A7Q8IWB4 1347 aa31.94■■■□□ 2.7
SMARCD1-212ENST00000551966 RAB3GAP2Q9H2M9 1393 aa31.94■■■□□ 2.7
SMARCD1-212ENST00000551966 DCAF11Q8TEB1 546 aa31.93■■■□□ 2.7
SMARCD1-212ENST00000551966 COL14A1Q05707 1796 aaKnown RBP31.93■■■□□ 2.7
SMARCD1-212ENST00000551966 TULP4Q9NRJ4 1543 aa31.92■■■□□ 2.7
SMARCD1-212ENST00000551966 EN1Q05925 392 aaPredicted RBP31.91■■■□□ 2.7
SMARCD1-212ENST00000551966 NGDNQ8NEJ9 315 aaKnown RBP31.91■■■□□ 2.7
SMARCD1-212ENST00000551966 PAK3O75914 559 aaPredicted RBP31.9■■■□□ 2.7
SMARCD1-212ENST00000551966 HRCP23327 699 aa31.89■■■□□ 2.7
SMARCD1-212ENST00000551966 EIF3AQ14152 1382 aaKnown RBP31.89■■■□□ 2.7
SMARCD1-212ENST00000551966 LRP5O75197 1615 aa31.88■■■□□ 2.69
SMARCD1-212ENST00000551966 CRYBG1Q9Y4K1 1723 aa31.86■■■□□ 2.69
SMARCD1-212ENST00000551966 PRDM11Q9NQV5 511 aa31.85■■■□□ 2.69
SMARCD1-212ENST00000551966 NUDT16Q96DE0 195 aaKnown RBP31.83■■■□□ 2.69
SMARCD1-212ENST00000551966 THSD7AQ9UPZ6 1657 aa31.81■■■□□ 2.68
SMARCD1-212ENST00000551966 CHRNA2Q15822 529 aa31.81■■■□□ 2.68
SMARCD1-212ENST00000551966 STAC3Q96MF2 364 aa31.81■■■□□ 2.68
SMARCD1-212ENST00000551966 SPATA31A1Q5TZJ5 1347 aa31.8■■■□□ 2.68
SMARCD1-212ENST00000551966 KIAA0232Q92628 1395 aa31.8■■■□□ 2.68
SMARCD1-212ENST00000551966 RGPD1P0DJD0 1748 aa31.78■■■□□ 2.68
SMARCD1-212ENST00000551966 ATP7BP35670 1465 aa31.78■■■□□ 2.68
SMARCD1-212ENST00000551966 R3HDM1Q15032 1099 aaKnown RBP31.77■■■□□ 2.68
SMARCD1-212ENST00000551966 EZH2Q15910 746 aaKnown RBP31.77■■■□□ 2.68
SMARCD1-212ENST00000551966 NUTM2GQ5VZR2 741 aa31.76■■■□□ 2.67
SMARCD1-212ENST00000551966 CDK19Q9BWU1 502 aa31.76■■■□□ 2.67
SMARCD1-212ENST00000551966 STRN4Q9NRL3 753 aa31.76■■■□□ 2.67
SMARCD1-212ENST00000551966 DISP2A7MBM2 1401 aa31.75■■■□□ 2.67
SMARCD1-212ENST00000551966 ZC3H6P61129 1189 aaKnown RBP31.75■■■□□ 2.67
SMARCD1-212ENST00000551966 ARHGEF28Q8N1W1 1705 aaKnown RBP31.74■■■□□ 2.67
SMARCD1-212ENST00000551966 CAMKK2Q96RR4 588 aa31.73■■■□□ 2.67
SMARCD1-212ENST00000551966 TNS1Q9HBL0 1735 aaKnown RBP31.72■■■□□ 2.67
SMARCD1-212ENST00000551966 TRIM37O94972 964 aa31.72■■■□□ 2.67
SMARCD1-212ENST00000551966 NBPF8Q3BBV2 869 aa31.72■■■□□ 2.67
SMARCD1-212ENST00000551966 FAM196AQ6ZSG2 479 aa31.71■■■□□ 2.67
SMARCD1-212ENST00000551966 ACEP12821 1306 aa31.7■■■□□ 2.66
SMARCD1-212ENST00000551966 PHRF1Q9P1Y6 1649 aaKnown RBP31.69■■■□□ 2.66
SMARCD1-212ENST00000551966 ITSN1Q15811 1721 aa31.69■■■□□ 2.66
SMARCD1-212ENST00000551966 POLR3AO14802 1390 aaPredicted RBP31.68■■■□□ 2.66
SMARCD1-212ENST00000551966 USP35Q9P2H5 1018 aa31.68■■■□□ 2.66
SMARCD1-212ENST00000551966 PLEKHG3A1L390 1219 aa31.67■■■□□ 2.66
SMARCD1-212ENST00000551966 CCDC61Q9Y6R9 512 aa31.67■■■□□ 2.66
SMARCD1-212ENST00000551966 APBA3O96018 575 aa31.65■■■□□ 2.66
SMARCD1-212ENST00000551966 EVA1CP58658 441 aa31.65■■■□□ 2.66
SMARCD1-212ENST00000551966 BARGINQ6ZT62 677 aa31.65■■■□□ 2.66
SMARCD1-212ENST00000551966 LARP1Q6PKG0 1096 aaKnown RBP31.63■■■□□ 2.65
SMARCD1-212ENST00000551966 SSH2Q76I76 1423 aa31.62■■■□□ 2.65
SMARCD1-212ENST00000551966 CAMTA1Q9Y6Y1 1673 aa31.62■■■□□ 2.65
SMARCD1-212ENST00000551966 ABTB2Q8N961 1025 aa31.61■■■□□ 2.65
SMARCD1-212ENST00000551966 TOPAZ1Q8N9V7 1692 aa31.6■■■□□ 2.65
SMARCD1-212ENST00000551966 PDE3BQ13370 1112 aa31.59■■■□□ 2.65
SMARCD1-212ENST00000551966 NBPF1Q3BBV0 1214 aa31.59■■■□□ 2.65
SMARCD1-212ENST00000551966 CPDO75976 1380 aa31.56■■■□□ 2.64
SMARCD1-212ENST00000551966 USP19O94966 1318 aa31.56■■■□□ 2.64
SMARCD1-212ENST00000551966 TCP11L2Q8N4U5 519 aa31.56■■■□□ 2.64
SMARCD1-212ENST00000551966 NRKQ7Z2Y5 1582 aa31.56■■■□□ 2.64
SMARCD1-212ENST00000551966 PARD3Q8TEW0 1356 aa31.55■■■□□ 2.64
SMARCD1-212ENST00000551966 GCP02774 474 aa31.54■■■□□ 2.64
SMARCD1-212ENST00000551966 LMO7Q8WWI1 1683 aa31.54■■■□□ 2.64
SMARCD1-212ENST00000551966 NLRP13Q86W25 1043 aa31.52■■■□□ 2.64
SMARCD1-212ENST00000551966 THRAP3Q9Y2W1 955 aaKnown RBP31.5■■■□□ 2.63
SMARCD1-212ENST00000551966 KIAA1210Q9ULL0 1709 aa31.49■■■□□ 2.63
SMARCD1-212ENST00000551966 CABP2Q9NPB3 220 aa31.49■■■□□ 2.63
SMARCD1-212ENST00000551966 SRPK2P78362 688 aaKnown RBP31.48■■■□□ 2.63
SMARCD1-212ENST00000551966 PPIP5K1Q6PFW1 1433 aa31.48■■■□□ 2.63
SMARCD1-212ENST00000551966 RREB1Q92766 1687 aa31.48■■■□□ 2.63
SMARCD1-212ENST00000551966 NBPF14Q5TI25 921 aa31.45■■■□□ 2.63
SMARCD1-212ENST00000551966 NUP188Q5SRE5 1749 aa31.44■■■□□ 2.62
SMARCD1-212ENST00000551966 COL5A2P05997 1499 aaPredicted RBP31.44■■■□□ 2.62
SMARCD1-212ENST00000551966 CENPJQ9HC77 1338 aaPredicted RBP31.43■■■□□ 2.62
SMARCD1-212ENST00000551966 CABP1Q9NZU7 370 aa31.42■■■□□ 2.62
SMARCD1-212ENST00000551966 PARP4Q9UKK3 1724 aaKnown RBP31.39■■■□□ 2.62
SMARCD1-212ENST00000551966 ZBTB7CA1YPR0 619 aa31.39■■■□□ 2.62
SMARCD1-212ENST00000551966 NLRP6P59044 892 aa31.39■■■□□ 2.62
SMARCD1-212ENST00000551966 BRD4O60885 1362 aaPredicted RBP31.39■■■□□ 2.62
SMARCD1-212ENST00000551966 CRB1P82279 1406 aa31.39■■■□□ 2.62
SMARCD1-212ENST00000551966 USP6P35125 1406 aa31.36■■■□□ 2.61
SMARCD1-212ENST00000551966 AATKQ6ZMQ8 1374 aa31.36■■■□□ 2.61
SMARCD1-212ENST00000551966 C11orf95C9JLR9 678 aaPredicted RBP31.34■■■□□ 2.61
SMARCD1-212ENST00000551966 PTF1AQ7RTS3 328 aa31.34■■■□□ 2.61
SMARCD1-212ENST00000551966 AXIN2Q9Y2T1 843 aa31.34■■■□□ 2.61
SMARCD1-212ENST00000551966 PEAK1Q9H792 1746 aa31.34■■■□□ 2.61
SMARCD1-212ENST00000551966 KCNQ2O43526 872 aa31.33■■■□□ 2.61
SMARCD1-212ENST00000551966 PLSCR1O15162 318 aa31.32■■■□□ 2.6
SMARCD1-212ENST00000551966 SPON1Q9HCB6 807 aa31.32■■■□□ 2.6
SMARCD1-212ENST00000551966 SLIT3O75094 1523 aa31.32■■■□□ 2.6
SMARCD1-212ENST00000551966 DDB1Q16531 1140 aa31.31■■■□□ 2.6
SMARCD1-212ENST00000551966 OVOS2A0A0G2JMS6 1433 aa31.31■■■□□ 2.6
SMARCD1-212ENST00000551966 OVOS2A0A0J9YW53 1432 aa31.31■■■□□ 2.6
SMARCD1-212ENST00000551966 OVOS2Q6IE36 1432 aa31.31■■■□□ 2.6
SMARCD1-212ENST00000551966 TOM1L2Q6ZVM7 507 aa31.3■■■□□ 2.6
SMARCD1-212ENST00000551966 COL18A1P39060 1754 aa31.3■■■□□ 2.6
SMARCD1-212ENST00000551966 QRICH2Q9H0J4 1663 aa31.29■■■□□ 2.6
SMARCD1-212ENST00000551966 SBF2Q86WG5 1849 aa31.27■■■□□ 2.6
SMARCD1-212ENST00000551966 PROM2Q8N271 834 aa31.27■■■□□ 2.6
SMARCD1-212ENST00000551966 MARCH10Q8NA82 808 aaPredicted RBP31.27■■■□□ 2.6
SMARCD1-212ENST00000551966 BCL11BQ9C0K0 894 aaPredicted RBP31.26■■■□□ 2.59
SMARCD1-212ENST00000551966 PPP1R1BQ9UD71 204 aaPredicted RBP31.26■■■□□ 2.59
SMARCD1-212ENST00000551966 LRRC37A3O60309 1634 aa31.26■■■□□ 2.59
SMARCD1-212ENST00000551966 YY1P25490 414 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms