RNA–Protein interactions for RNA: ENST00000551331.1

DDX23-210, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-210	ENST00000551331	ABCC11	Q96J66	1382 aa		13.89	□□□□□ -0.19
DDX23-210	ENST00000551331	UTRN	P46939	3433 aa		13.89	□□□□□ -0.19
DDX23-210	ENST00000551331	PIK3C2G	O75747	1445 aa		13.89	□□□□□ -0.19
DDX23-210	ENST00000551331	NBPF8	Q3BBV2	869 aa		13.88	□□□□□ -0.19
DDX23-210	ENST00000551331	NBPF14	Q5TI25	921 aa		13.88	□□□□□ -0.19
DDX23-210	ENST00000551331	ADGRF5	Q8IZF2	1346 aa		13.88	□□□□□ -0.19
DDX23-210	ENST00000551331	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX23-210	ENST00000551331	LMOD2	Q6P5Q4	547 aa		13.87	□□□□□ -0.19
DDX23-210	ENST00000551331	STK26	Q9P289	416 aa		13.87	□□□□□ -0.19
DDX23-210	ENST00000551331	CRYBG1	Q9Y4K1	1723 aa		13.87	□□□□□ -0.19
DDX23-210	ENST00000551331	ALS2	Q96Q42	1657 aa		13.86	□□□□□ -0.19
DDX23-210	ENST00000551331	NRK	Q7Z2Y5	1582 aa		13.86	□□□□□ -0.19
DDX23-210	ENST00000551331	CASZ1	Q86V15	1759 aa		13.86	□□□□□ -0.19
DDX23-210	ENST00000551331	CHD4	Q14839	1912 aa		13.85	□□□□□ -0.19
DDX23-210	ENST00000551331	SPATA31A1	Q5TZJ5	1347 aa		13.85	□□□□□ -0.19
DDX23-210	ENST00000551331	ACIN1	Q9UKV3	1341 aa	Known RBP	13.85	□□□□□ -0.19
DDX23-210	ENST00000551331	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.84	□□□□□ -0.19
DDX23-210	ENST00000551331	CEP350	Q5VT06	3117 aa		13.83	□□□□□ -0.2
DDX23-210	ENST00000551331	MYOM1	P52179	1685 aa		13.82	□□□□□ -0.2
DDX23-210	ENST00000551331	SIRT1	Q96EB6	747 aa		13.82	□□□□□ -0.2
DDX23-210	ENST00000551331	RGL3	Q3MIN7	710 aa		13.81	□□□□□ -0.2
DDX23-210	ENST00000551331	TMEM132E	Q6IEE7	984 aa		13.81	□□□□□ -0.2
DDX23-210	ENST00000551331	MPHOSPH9	Q99550	1183 aa		13.8	□□□□□ -0.2
DDX23-210	ENST00000551331	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX23-210	ENST00000551331	RGPD4	Q7Z3J3	1758 aa		13.8	□□□□□ -0.2
DDX23-210	ENST00000551331	PTGER2	P43116	358 aa		13.79	□□□□□ -0.2
DDX23-210	ENST00000551331	PCGF6	Q9BYE7	350 aa		13.79	□□□□□ -0.2
DDX23-210	ENST00000551331	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX23-210	ENST00000551331	PMFBP1	Q8TBY8	1022 aa		13.78	□□□□□ -0.2
DDX23-210	ENST00000551331	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX23-210	ENST00000551331	PRDM11	Q9NQV5	511 aa		13.78	□□□□□ -0.2
DDX23-210	ENST00000551331	DHX57	Q6P158	1386 aa	Known RBP	13.78	□□□□□ -0.2
DDX23-210	ENST00000551331	DLC1	Q96QB1	1528 aa		13.78	□□□□□ -0.2
DDX23-210	ENST00000551331	BARGIN	Q6ZT62	677 aa		13.77	□□□□□ -0.21
DDX23-210	ENST00000551331	ANKAR	Q7Z5J8	1434 aa		13.77	□□□□□ -0.21
DDX23-210	ENST00000551331	C14orf93	Q9H972	538 aa	Known RBP	13.77	□□□□□ -0.21
DDX23-210	ENST00000551331	KIAA0232	Q92628	1395 aa		13.75	□□□□□ -0.21
DDX23-210	ENST00000551331	PDE3B	Q13370	1112 aa		13.75	□□□□□ -0.21
DDX23-210	ENST00000551331	SYT17	Q9BSW7	474 aa		13.75	□□□□□ -0.21
DDX23-210	ENST00000551331	PEAK1	Q9H792	1746 aa		13.74	□□□□□ -0.21
DDX23-210	ENST00000551331	ZBTB7A	O95365	584 aa		13.74	□□□□□ -0.21
DDX23-210	ENST00000551331	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX23-210	ENST00000551331	STRN4	Q9NRL3	753 aa		13.74	□□□□□ -0.21
DDX23-210	ENST00000551331	EIF3A	Q14152	1382 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	TRIM26	Q12899	539 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	CHRNA2	Q15822	529 aa		13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	SBF2	Q86WG5	1849 aa		13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	PARP4	Q9UKK3	1724 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	SSH2	Q76I76	1423 aa		13.73	□□□□□ -0.21
DDX23-210	ENST00000551331	GPRASP1	Q5JY77	1395 aa		13.72	□□□□□ -0.21
DDX23-210	ENST00000551331	ADGRB1	O14514	1584 aa		13.72	□□□□□ -0.21
DDX23-210	ENST00000551331	PLSCR1	O15162	318 aa		13.72	□□□□□ -0.21
DDX23-210	ENST00000551331	PRAM1	Q96QH2	718 aa		13.72	□□□□□ -0.21
DDX23-210	ENST00000551331	USP35	Q9P2H5	1018 aa		13.72	□□□□□ -0.21
DDX23-210	ENST00000551331	GIGYF1	O75420	1035 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX23-210	ENST00000551331	CFAP70	Q5T0N1	1121 aa		13.71	□□□□□ -0.21
DDX23-210	ENST00000551331	SGIP1	Q9BQI5	828 aa		13.71	□□□□□ -0.21
DDX23-210	ENST00000551331	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX23-210	ENST00000551331	PRR36	Q9H6K5	1346 aa		13.7	□□□□□ -0.22
DDX23-210	ENST00000551331	PROM2	Q8N271	834 aa		13.7	□□□□□ -0.22
DDX23-210	ENST00000551331	TULP4	Q9NRJ4	1543 aa		13.69	□□□□□ -0.22
DDX23-210	ENST00000551331	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
DDX23-210	ENST00000551331	TCP11L2	Q8N4U5	519 aa		13.69	□□□□□ -0.22
DDX23-210	ENST00000551331	SHANK3	Q9BYB0	1731 aa		13.69	□□□□□ -0.22
DDX23-210	ENST00000551331	LMO7	Q8WWI1	1683 aa		13.69	□□□□□ -0.22
DDX23-210	ENST00000551331	LARP1	Q6PKG0	1096 aa	Known RBP	13.68	□□□□□ -0.22
DDX23-210	ENST00000551331	POGK	Q9P215	609 aa		13.68	□□□□□ -0.22
DDX23-210	ENST00000551331	MAP3K5	Q99683	1374 aa		13.68	□□□□□ -0.22
DDX23-210	ENST00000551331	OVOS2	A0A0G2JMS6	1433 aa		13.67	□□□□□ -0.22
DDX23-210	ENST00000551331	OVOS2	A0A0J9YW53	1432 aa		13.67	□□□□□ -0.22
DDX23-210	ENST00000551331	OVOS2	Q6IE36	1432 aa		13.67	□□□□□ -0.22
DDX23-210	ENST00000551331	C11orf95	C9JLR9	678 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX23-210	ENST00000551331	PTF1A	Q7RTS3	328 aa		13.67	□□□□□ -0.22
DDX23-210	ENST00000551331	ZC3H6	P61129	1189 aa	Known RBP	13.66	□□□□□ -0.22
DDX23-210	ENST00000551331	STAC3	Q96MF2	364 aa		13.66	□□□□□ -0.22
DDX23-210	ENST00000551331	PAK3	O75914	559 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	MTFR1L	Q9H019	292 aa		13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	THRAP3	Q9Y2W1	955 aa	Known RBP	13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	RAB3GAP2	Q9H2M9	1393 aa		13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	ATP7B	P35670	1465 aa		13.65	□□□□□ -0.22
DDX23-210	ENST00000551331	LRRC37A3	O60309	1634 aa		13.64	□□□□□ -0.23
DDX23-210	ENST00000551331	EVA1C	P58658	441 aa		13.64	□□□□□ -0.23
DDX23-210	ENST00000551331	SLC15A2	Q16348	729 aa		13.63	□□□□□ -0.23
DDX23-210	ENST00000551331	ITSN1	Q15811	1721 aa		13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	CPD	O75976	1380 aa		13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	WASL	O00401	505 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	NGDN	Q8NEJ9	315 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	ARX	Q96QS3	562 aa		13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	TRAK1	Q9UPV9	953 aa		13.62	□□□□□ -0.23
DDX23-210	ENST00000551331	STK32B	Q9NY57	414 aa		13.61	□□□□□ -0.23
DDX23-210	ENST00000551331	BCL9	O00512	1426 aa		13.61	□□□□□ -0.23
DDX23-210	ENST00000551331	COL5A2	P05997	1499 aa	Predicted RBP	13.61	□□□□□ -0.23
DDX23-210	ENST00000551331	GPR162	Q16538	588 aa		13.6	□□□□□ -0.23
DDX23-210	ENST00000551331	TXNRD1	Q16881	649 aa		13.6	□□□□□ -0.23
DDX23-210	ENST00000551331	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-210	ENST00000551331	GOLGB1	Q14789	3259 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-210	ENST00000551331	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms