RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 NCAPD3P42695 1498 aa9.57□□□□□ -0.88
SCAF11-214ENST00000550893 LYPD8Q6UX82 237 aa9.56□□□□□ -0.88
SCAF11-214ENST00000550893 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
SCAF11-214ENST00000550893 TSC1Q92574 1164 aa9.56□□□□□ -0.88
SCAF11-214ENST00000550893 EVA1BQ9NVM1 165 aa9.56□□□□□ -0.88
SCAF11-214ENST00000550893 BAZ1AQ9NRL2 1556 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-214ENST00000550893 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-214ENST00000550893 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-214ENST00000550893 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
SCAF11-214ENST00000550893 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.54□□□□□ -0.88
SCAF11-214ENST00000550893 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-214ENST00000550893 SKOR1P84550 965 aa9.53□□□□□ -0.88
SCAF11-214ENST00000550893 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
SCAF11-214ENST00000550893 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
SCAF11-214ENST00000550893 WNT7AO00755 349 aa9.51□□□□□ -0.89
SCAF11-214ENST00000550893 CTHP32929 405 aa9.51□□□□□ -0.89
SCAF11-214ENST00000550893 LCE2BO14633 110 aa9.5□□□□□ -0.89
SCAF11-214ENST00000550893 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-214ENST00000550893 WNT7BP56706 349 aa9.5□□□□□ -0.89
SCAF11-214ENST00000550893 HELBQ8NG08 1087 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-214ENST00000550893 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
SCAF11-214ENST00000550893 WIZO95785 1651 aa9.49□□□□□ -0.89
SCAF11-214ENST00000550893 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
SCAF11-214ENST00000550893 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
SCAF11-214ENST00000550893 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
SCAF11-214ENST00000550893 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
SCAF11-214ENST00000550893 TOR4AQ9NXH8 423 aa9.49□□□□□ -0.89
SCAF11-214ENST00000550893 SH3BP2P78314 561 aa9.48□□□□□ -0.89
SCAF11-214ENST00000550893 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
SCAF11-214ENST00000550893 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
SCAF11-214ENST00000550893 BAP1Q92560 729 aa9.48□□□□□ -0.89
SCAF11-214ENST00000550893 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
SCAF11-214ENST00000550893 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
SCAF11-214ENST00000550893 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
SCAF11-214ENST00000550893 DGAT1O75907 488 aa9.46□□□□□ -0.9
SCAF11-214ENST00000550893 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-214ENST00000550893 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
SCAF11-214ENST00000550893 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
SCAF11-214ENST00000550893 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
SCAF11-214ENST00000550893 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
SCAF11-214ENST00000550893 NESP48681 1621 aa9.44□□□□□ -0.9
SCAF11-214ENST00000550893 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
SCAF11-214ENST00000550893 AP1G2O75843 785 aa9.43□□□□□ -0.9
SCAF11-214ENST00000550893 RFC5P40937 340 aa9.43□□□□□ -0.9
SCAF11-214ENST00000550893 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
SCAF11-214ENST00000550893 LRRN4Q8WUT4 740 aa9.43□□□□□ -0.9
SCAF11-214ENST00000550893 MYT1Q01538 1121 aa9.42□□□□□ -0.9
SCAF11-214ENST00000550893 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
SCAF11-214ENST00000550893 J3QL48 77 aa9.41□□□□□ -0.9
SCAF11-214ENST00000550893 SIAH2O43255 324 aa9.41□□□□□ -0.9
SCAF11-214ENST00000550893 SMPD1P17405 629 aa9.41□□□□□ -0.9
SCAF11-214ENST00000550893 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
SCAF11-214ENST00000550893 FOXJ1Q92949 421 aa9.4□□□□□ -0.9
SCAF11-214ENST00000550893 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
SCAF11-214ENST00000550893 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
SCAF11-214ENST00000550893 ARMC2Q8NEN0 867 aa9.38□□□□□ -0.91
SCAF11-214ENST00000550893 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
SCAF11-214ENST00000550893 AVPP01185 164 aa9.37□□□□□ -0.91
SCAF11-214ENST00000550893 NR6A1Q15406 480 aa9.37□□□□□ -0.91
SCAF11-214ENST00000550893 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-214ENST00000550893 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
SCAF11-214ENST00000550893 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
SCAF11-214ENST00000550893 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
SCAF11-214ENST00000550893 AGERQ15109 404 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
SCAF11-214ENST00000550893 BPHLQ86WA6 291 aaPredicted RBP9.34□□□□□ -0.91
SCAF11-214ENST00000550893 HPS1Q92902 700 aa9.34□□□□□ -0.91
SCAF11-214ENST00000550893 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
SCAF11-214ENST00000550893 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
SCAF11-214ENST00000550893 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
SCAF11-214ENST00000550893 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
SCAF11-214ENST00000550893 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
SCAF11-214ENST00000550893 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
SCAF11-214ENST00000550893 MPNDQ8N594 471 aa9.32□□□□□ -0.92
SCAF11-214ENST00000550893 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
SCAF11-214ENST00000550893 PRDM2Q13029 1718 aa9.31□□□□□ -0.92
SCAF11-214ENST00000550893 CTC1Q2NKJ3 1217 aa9.31□□□□□ -0.92
SCAF11-214ENST00000550893 ZNF775Q96BV0 537 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-214ENST00000550893 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
SCAF11-214ENST00000550893 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
SCAF11-214ENST00000550893 AXIN1O15169 862 aa9.3□□□□□ -0.92
SCAF11-214ENST00000550893 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-214ENST00000550893 PDXDC2PQ6P474 469 aa9.3□□□□□ -0.92
SCAF11-214ENST00000550893 DACH1Q9UI36 760 aa9.3□□□□□ -0.92
SCAF11-214ENST00000550893 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
SCAF11-214ENST00000550893 CDK15Q96Q40 435 aa9.29□□□□□ -0.92
SCAF11-214ENST00000550893 C1QTNF2Q9BXJ5 285 aa9.29□□□□□ -0.92
SCAF11-214ENST00000550893 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
SCAF11-214ENST00000550893 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
SCAF11-214ENST00000550893 ZC3H4Q9UPT8 1303 aaKnown RBP9.28□□□□□ -0.92
SCAF11-214ENST00000550893 CUX2O14529 1486 aa9.28□□□□□ -0.92
SCAF11-214ENST00000550893 ADH1CP00326 375 aa9.27□□□□□ -0.93
SCAF11-214ENST00000550893 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
SCAF11-214ENST00000550893 POTECB2RU33 542 aa9.26□□□□□ -0.93
SCAF11-214ENST00000550893 NNTQ13423 1086 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms