RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 KIF20BQ96Q89 1820 aa15.61■□□□□ 0.09
CTDSP2-206ENST00000550144 FYB1O15117 783 aa15.61■□□□□ 0.09
CTDSP2-206ENST00000550144 BRD4O60885 1362 aaPredicted RBP15.61■□□□□ 0.09
CTDSP2-206ENST00000550144 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
CTDSP2-206ENST00000550144 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
CTDSP2-206ENST00000550144 GGNBP2Q9H3C7 697 aa15.6■□□□□ 0.09
CTDSP2-206ENST00000550144 MST1RQ04912 1400 aa15.6■□□□□ 0.09
CTDSP2-206ENST00000550144 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
CTDSP2-206ENST00000550144 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
CTDSP2-206ENST00000550144 TTC21BQ7Z4L5 1316 aa15.59■□□□□ 0.09
CTDSP2-206ENST00000550144 ANKRD26Q9UPS8 1709 aa15.59■□□□□ 0.09
CTDSP2-206ENST00000550144 KIF1AQ12756 1690 aa15.58■□□□□ 0.08
CTDSP2-206ENST00000550144 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
CTDSP2-206ENST00000550144 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.08
CTDSP2-206ENST00000550144 NME9Q86XW9 330 aa15.57■□□□□ 0.08
CTDSP2-206ENST00000550144 SSH2Q76I76 1423 aa15.57■□□□□ 0.08
CTDSP2-206ENST00000550144 TNNT2P45379 298 aaPredicted RBP15.56■□□□□ 0.08
CTDSP2-206ENST00000550144 PSME1Q06323 249 aa15.56■□□□□ 0.08
CTDSP2-206ENST00000550144 COG3Q96JB2 828 aa15.55■□□□□ 0.08
CTDSP2-206ENST00000550144 FOXO3O43524 673 aa15.53■□□□□ 0.08
CTDSP2-206ENST00000550144 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
CTDSP2-206ENST00000550144 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
CTDSP2-206ENST00000550144 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
CTDSP2-206ENST00000550144 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
CTDSP2-206ENST00000550144 SLAIN2Q9P270 581 aa15.52■□□□□ 0.08
CTDSP2-206ENST00000550144 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
CTDSP2-206ENST00000550144 FAM9BQ8IZU0 186 aa15.51■□□□□ 0.07
CTDSP2-206ENST00000550144 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
CTDSP2-206ENST00000550144 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
CTDSP2-206ENST00000550144 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
CTDSP2-206ENST00000550144 USP31Q70CQ4 1352 aa15.5■□□□□ 0.07
CTDSP2-206ENST00000550144 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
CTDSP2-206ENST00000550144 KRT28Q7Z3Y7 464 aa15.5■□□□□ 0.07
CTDSP2-206ENST00000550144 NPHP3Q7Z494 1330 aa15.49■□□□□ 0.07
CTDSP2-206ENST00000550144 PIK3C2AO00443 1686 aa15.49■□□□□ 0.07
CTDSP2-206ENST00000550144 MTHFSP49914 203 aa15.49■□□□□ 0.07
CTDSP2-206ENST00000550144 ABTB2Q8N961 1025 aa15.49■□□□□ 0.07
CTDSP2-206ENST00000550144 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
CTDSP2-206ENST00000550144 NLRP6P59044 892 aa15.48■□□□□ 0.07
CTDSP2-206ENST00000550144 XPCQ01831 940 aaPredicted RBP15.48■□□□□ 0.07
CTDSP2-206ENST00000550144 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
CTDSP2-206ENST00000550144 AATKQ6ZMQ8 1374 aa15.48■□□□□ 0.07
CTDSP2-206ENST00000550144 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.07
CTDSP2-206ENST00000550144 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
CTDSP2-206ENST00000550144 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTDSP2-206ENST00000550144 NUTM2GQ5VZR2 741 aa15.45■□□□□ 0.06
CTDSP2-206ENST00000550144 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
CTDSP2-206ENST00000550144 SBNO1A3KN83 1393 aa15.45■□□□□ 0.06
CTDSP2-206ENST00000550144 DDX17Q92841 729 aaKnown RBP15.44■□□□□ 0.06
CTDSP2-206ENST00000550144 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
CTDSP2-206ENST00000550144 FBLN1P23142 703 aa15.43■□□□□ 0.06
CTDSP2-206ENST00000550144 LMOD2Q6P5Q4 547 aa15.43■□□□□ 0.06
CTDSP2-206ENST00000550144 PXDNQ92626 1479 aa15.43■□□□□ 0.06
CTDSP2-206ENST00000550144 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
CTDSP2-206ENST00000550144 HSPA1LP34931 641 aa15.42■□□□□ 0.06
CTDSP2-206ENST00000550144 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
CTDSP2-206ENST00000550144 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
CTDSP2-206ENST00000550144 INSRP06213 1382 aa15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 SOX12O15370 315 aa15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
CTDSP2-206ENST00000550144 CDK12Q9NYV4 1490 aaPredicted RBP15.4■□□□□ 0.06
CTDSP2-206ENST00000550144 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
CTDSP2-206ENST00000550144 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
CTDSP2-206ENST00000550144 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
CTDSP2-206ENST00000550144 SOS2Q07890 1332 aaPredicted RBP15.4■□□□□ 0.06
CTDSP2-206ENST00000550144 ARHGEF10O15013 1369 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 TOM1O60784 492 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 ADAMTS8Q9UP79 889 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CTDSP2-206ENST00000550144 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
CTDSP2-206ENST00000550144 USP19O94966 1318 aa15.38■□□□□ 0.05
CTDSP2-206ENST00000550144 MAP3K19Q56UN5 1328 aa15.38■□□□□ 0.05
CTDSP2-206ENST00000550144 ROBO1Q9Y6N7 1651 aa15.38■□□□□ 0.05
CTDSP2-206ENST00000550144 SLIT3O75094 1523 aa15.38■□□□□ 0.05
CTDSP2-206ENST00000550144 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
CTDSP2-206ENST00000550144 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
CTDSP2-206ENST00000550144 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
CTDSP2-206ENST00000550144 AMPHP49418 695 aa15.36■□□□□ 0.05
CTDSP2-206ENST00000550144 NFAT5O94916 1531 aa15.36■□□□□ 0.05
CTDSP2-206ENST00000550144 FLT4P35916 1363 aa15.36■□□□□ 0.05
CTDSP2-206ENST00000550144 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
CTDSP2-206ENST00000550144 GCP02774 474 aa15.35■□□□□ 0.05
CTDSP2-206ENST00000550144 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
CTDSP2-206ENST00000550144 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
CTDSP2-206ENST00000550144 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
CTDSP2-206ENST00000550144 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
CTDSP2-206ENST00000550144 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTDSP2-206ENST00000550144 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
CTDSP2-206ENST00000550144 IL13P35225 146 aa15.33■□□□□ 0.04
CTDSP2-206ENST00000550144 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
CTDSP2-206ENST00000550144 LTN1O94822 1766 aa15.31■□□□□ 0.04
CTDSP2-206ENST00000550144 HOXC9P31274 260 aa15.31■□□□□ 0.04
CTDSP2-206ENST00000550144 HSP90AB2PQ58FF8 381 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms