RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
HDAC7-229ENST00000549883 CABP1Q9NZU7 370 aa13.95□□□□□ -0.18
HDAC7-229ENST00000549883 RGS12O14924 1447 aa13.93□□□□□ -0.18
HDAC7-229ENST00000549883 ATRNO75882 1429 aa13.93□□□□□ -0.18
HDAC7-229ENST00000549883 HAP1P54257 671 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-229ENST00000549883 SLIT2O94813 1529 aa13.93□□□□□ -0.18
HDAC7-229ENST00000549883 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
HDAC7-229ENST00000549883 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
HDAC7-229ENST00000549883 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
HDAC7-229ENST00000549883 PHRF1Q9P1Y6 1649 aaKnown RBP13.92□□□□□ -0.18
HDAC7-229ENST00000549883 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.92□□□□□ -0.18
HDAC7-229ENST00000549883 AKAP12Q02952 1782 aa13.91□□□□□ -0.18
HDAC7-229ENST00000549883 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-229ENST00000549883 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
HDAC7-229ENST00000549883 GLI3P10071 1580 aa13.89□□□□□ -0.19
HDAC7-229ENST00000549883 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-229ENST00000549883 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
HDAC7-229ENST00000549883 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
HDAC7-229ENST00000549883 USP6P35125 1406 aa13.89□□□□□ -0.19
HDAC7-229ENST00000549883 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
HDAC7-229ENST00000549883 ST20-MTHFSA0A0A6YYL1 179 aa13.88□□□□□ -0.19
HDAC7-229ENST00000549883 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-229ENST00000549883 TESK2Q96S53 571 aa13.88□□□□□ -0.19
HDAC7-229ENST00000549883 COL14A1Q05707 1796 aaKnown RBP13.87□□□□□ -0.19
HDAC7-229ENST00000549883 ABTB2Q8N961 1025 aa13.87□□□□□ -0.19
HDAC7-229ENST00000549883 PIK3C2AO00443 1686 aa13.87□□□□□ -0.19
HDAC7-229ENST00000549883 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
HDAC7-229ENST00000549883 NRKQ7Z2Y5 1582 aa13.87□□□□□ -0.19
HDAC7-229ENST00000549883 BRWD3Q6RI45 1802 aa13.86□□□□□ -0.19
HDAC7-229ENST00000549883 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
HDAC7-229ENST00000549883 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
HDAC7-229ENST00000549883 GJD4Q96KN9 370 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-229ENST00000549883 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
HDAC7-229ENST00000549883 CD163L1Q9NR16 1453 aa13.86□□□□□ -0.19
HDAC7-229ENST00000549883 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
HDAC7-229ENST00000549883 MON2Q7Z3U7 1717 aa13.85□□□□□ -0.19
HDAC7-229ENST00000549883 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
HDAC7-229ENST00000549883 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
HDAC7-229ENST00000549883 USP47Q96K76 1375 aa13.84□□□□□ -0.19
HDAC7-229ENST00000549883 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
HDAC7-229ENST00000549883 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
HDAC7-229ENST00000549883 USP19O94966 1318 aa13.84□□□□□ -0.19
HDAC7-229ENST00000549883 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.19
HDAC7-229ENST00000549883 VPS72Q15906 364 aa13.83□□□□□ -0.2
HDAC7-229ENST00000549883 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDAC7-229ENST00000549883 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
HDAC7-229ENST00000549883 TTC21BQ7Z4L5 1316 aa13.83□□□□□ -0.2
HDAC7-229ENST00000549883 NLRP6P59044 892 aa13.82□□□□□ -0.2
HDAC7-229ENST00000549883 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
HDAC7-229ENST00000549883 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
HDAC7-229ENST00000549883 KTN1Q86UP2 1357 aaKnown RBP13.82□□□□□ -0.2
HDAC7-229ENST00000549883 GCP02774 474 aa13.81□□□□□ -0.2
HDAC7-229ENST00000549883 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
HDAC7-229ENST00000549883 TIMELESSQ9UNS1 1208 aa13.81□□□□□ -0.2
HDAC7-229ENST00000549883 CAMTA1Q9Y6Y1 1673 aa13.81□□□□□ -0.2
HDAC7-229ENST00000549883 SLIT3O75094 1523 aa13.8□□□□□ -0.2
HDAC7-229ENST00000549883 LMO7Q8WWI1 1683 aa13.8□□□□□ -0.2
HDAC7-229ENST00000549883 BRD4O60885 1362 aaPredicted RBP13.8□□□□□ -0.2
HDAC7-229ENST00000549883 COL18A1P39060 1754 aa13.79□□□□□ -0.2
HDAC7-229ENST00000549883 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
HDAC7-229ENST00000549883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDAC7-229ENST00000549883 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-229ENST00000549883 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
HDAC7-229ENST00000549883 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 SOX12O15370 315 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 NME9Q86XW9 330 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 SEPT12Q8IYM1 358 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 CPDO75976 1380 aa13.78□□□□□ -0.2
HDAC7-229ENST00000549883 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
HDAC7-229ENST00000549883 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
HDAC7-229ENST00000549883 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
HDAC7-229ENST00000549883 TTC21AQ8NDW8 1320 aa13.76□□□□□ -0.21
HDAC7-229ENST00000549883 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-229ENST00000549883 NFAT5O94916 1531 aa13.75□□□□□ -0.21
HDAC7-229ENST00000549883 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
HDAC7-229ENST00000549883 PUS7Q96PZ0 661 aaKnown RBP13.75□□□□□ -0.21
HDAC7-229ENST00000549883 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
HDAC7-229ENST00000549883 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
HDAC7-229ENST00000549883 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-229ENST00000549883 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
HDAC7-229ENST00000549883 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
HDAC7-229ENST00000549883 MYOM1P52179 1685 aa13.74□□□□□ -0.21
HDAC7-229ENST00000549883 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
HDAC7-229ENST00000549883 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
HDAC7-229ENST00000549883 EP400Q96L91 3159 aa13.73□□□□□ -0.21
HDAC7-229ENST00000549883 TMF1P82094 1093 aa13.73□□□□□ -0.21
HDAC7-229ENST00000549883 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
HDAC7-229ENST00000549883 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
HDAC7-229ENST00000549883 LTN1O94822 1766 aa13.73□□□□□ -0.21
HDAC7-229ENST00000549883 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-229ENST00000549883 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 A0A0G2JS52 829 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 EVA1CP58658 441 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 MYT1Q01538 1121 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
HDAC7-229ENST00000549883 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
HDAC7-229ENST00000549883 FBLN1P23142 703 aa13.7□□□□□ -0.22
HDAC7-229ENST00000549883 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms