RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 BLOC1S3Q6QNY0 202 aa15.16■□□□□ 0.02
PRIM1-204ENST00000549549 ZMIZ1Q9ULJ6 1067 aa15.16■□□□□ 0.02
PRIM1-204ENST00000549549 TK2O00142 265 aa15.15■□□□□ 0.02
PRIM1-204ENST00000549549 LRCH3Q96II8 777 aa15.14■□□□□ 0.01
PRIM1-204ENST00000549549 USP17L3A6NCW0 530 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 USP17L4A6NCW7 530 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 TMEM164Q5U3C3 297 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 USP17L1Q7RTZ2 530 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 ZNF687Q8N1G0 1237 aa15.13■□□□□ 0.01
PRIM1-204ENST00000549549 THAP11Q96EK4 314 aa15.12■□□□□ 0.01
PRIM1-204ENST00000549549 PTPRNQ16849 979 aa15.11■□□□□ 0.01
PRIM1-204ENST00000549549 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.11■□□□□ 0.01
PRIM1-204ENST00000549549 USP17L5A8MUK1 530 aa15.1■□□□□ 0.01
PRIM1-204ENST00000549549 SKIP12755 728 aa15.1■□□□□ 0.01
PRIM1-204ENST00000549549 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
PRIM1-204ENST00000549549 STK32AQ8WU08 396 aa15.1■□□□□ 0.01
PRIM1-204ENST00000549549 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
PRIM1-204ENST00000549549 JUNDP17535 347 aa15.09■□□□□ 0.01
PRIM1-204ENST00000549549 TXNDC2Q86VQ3 553 aa15.09■□□□□ 0.01
PRIM1-204ENST00000549549 FAM174AQ8TBP5 190 aa15.09■□□□□ 0.01
PRIM1-204ENST00000549549 NOVA2Q9UNW9 492 aaKnown RBP15.09■□□□□ 0.01
PRIM1-204ENST00000549549 GPSM3Q9Y4H4 160 aa15.09■□□□□ 0.01
PRIM1-204ENST00000549549 PHLDB3Q6NSJ2 640 aa15.08■□□□□ 0
PRIM1-204ENST00000549549 SCUBE3Q8IX30 993 aa15.08■□□□□ 0
PRIM1-204ENST00000549549 MAP10Q9P2G4 905 aa15.08■□□□□ 0
PRIM1-204ENST00000549549 FMNL1O95466 1100 aaPredicted RBP15.07■□□□□ 0
PRIM1-204ENST00000549549 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
PRIM1-204ENST00000549549 E9PSI1 815 aa15.06■□□□□ 0
PRIM1-204ENST00000549549 ZNF592Q92610 1267 aa15.06■□□□□ 0
PRIM1-204ENST00000549549 CEP126Q9P2H0 1117 aa15.06■□□□□ 0
PRIM1-204ENST00000549549 PHTF2Q8N3S3 785 aa15.05■□□□□ -0
PRIM1-204ENST00000549549 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
PRIM1-204ENST00000549549 OTUD5Q96G74 571 aa15.05■□□□□ -0
PRIM1-204ENST00000549549 LZTS3O60299 673 aaPredicted RBP15.04■□□□□ -0
PRIM1-204ENST00000549549 PDXDC2PQ6P474 469 aa15.04■□□□□ -0
PRIM1-204ENST00000549549 GPKOWQ92917 476 aaPredicted RBP eCLIP15.04■□□□□ -0
PRIM1-204ENST00000549549 MKRN1Q9UHC7 482 aaKnown RBP15.04■□□□□ -0
PRIM1-204ENST00000549549 NR1I2O75469 434 aa15.03■□□□□ -0
PRIM1-204ENST00000549549 SSFA2P28290 1259 aa15.03■□□□□ -0
PRIM1-204ENST00000549549 USP17L15C9J2P7 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L10C9JJH3 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L13C9JLJ4 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L12C9JPN9 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L11C9JVI0 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L21D6R901 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L18D6R9N7 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L22D6RA61 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L17D6RBQ6 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L19D6RCP7 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L20D6RJB6 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 USP17L24Q0WX57 530 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 PTK7Q13308 1070 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 CRTC2Q53ET0 693 aaPredicted RBP15.02■□□□□ -0
PRIM1-204ENST00000549549 ARMC2Q8NEN0 867 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 EVA1BQ9NVM1 165 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
PRIM1-204ENST00000549549 APLP1P51693 650 aa15.01□□□□□ -0.01
PRIM1-204ENST00000549549 PTK2Q05397 1052 aa15.01□□□□□ -0.01
PRIM1-204ENST00000549549 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
PRIM1-204ENST00000549549 DEPDC4Q8N2C3 294 aa15.01□□□□□ -0.01
PRIM1-204ENST00000549549 OCSTAMPQ9BR26 566 aa15.01□□□□□ -0.01
PRIM1-204ENST00000549549 PPP4CP60510 307 aa15□□□□□ -0.01
PRIM1-204ENST00000549549 CDCA7Q9BWT1 371 aaPredicted RBP15□□□□□ -0.01
PRIM1-204ENST00000549549 ATP5J2-PTCD1G3V325 749 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 HRO43593 1189 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 CTHP32929 405 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 SLFNL1Q499Z3 407 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 MSS51Q4VC12 460 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
PRIM1-204ENST00000549549 SLAIN2Q9P270 581 aa14.99□□□□□ -0.01
PRIM1-204ENST00000549549 SOWAHBA6NEL2 793 aa14.98□□□□□ -0.01
PRIM1-204ENST00000549549 CCNYL3P0C7X3 344 aa14.98□□□□□ -0.01
PRIM1-204ENST00000549549 ARID4AP29374 1257 aaPredicted RBP14.98□□□□□ -0.01
PRIM1-204ENST00000549549 EMP3P54852 163 aa14.98□□□□□ -0.01
PRIM1-204ENST00000549549 NCOA4Q13772 614 aa14.98□□□□□ -0.01
PRIM1-204ENST00000549549 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
PRIM1-204ENST00000549549 PCDHB3Q9Y5E6 796 aa14.98□□□□□ -0.01
PRIM1-204ENST00000549549 DXOO77932 396 aaKnown RBP14.97□□□□□ -0.01
PRIM1-204ENST00000549549 RASA1P20936 1047 aa14.97□□□□□ -0.01
PRIM1-204ENST00000549549 ADGRD1Q6QNK2 874 aa14.97□□□□□ -0.01
PRIM1-204ENST00000549549 ANKK1Q8NFD2 765 aa14.97□□□□□ -0.01
PRIM1-204ENST00000549549 ST18O60284 1047 aa14.96□□□□□ -0.01
PRIM1-204ENST00000549549 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
PRIM1-204ENST00000549549 RNF135Q8IUD6 432 aa14.96□□□□□ -0.01
PRIM1-204ENST00000549549 PLPP7Q8NBV4 271 aa14.96□□□□□ -0.01
PRIM1-204ENST00000549549 FAM200AQ8TCP9 573 aa14.96□□□□□ -0.01
PRIM1-204ENST00000549549 MMP16P51512 607 aa14.95□□□□□ -0.02
PRIM1-204ENST00000549549 MAP7D1Q3KQU3 841 aa14.95□□□□□ -0.02
PRIM1-204ENST00000549549 TSR3Q9UJK0 312 aaKnown RBP14.95□□□□□ -0.02
PRIM1-204ENST00000549549 HPS5Q9UPZ3 1129 aa14.95□□□□□ -0.02
PRIM1-204ENST00000549549 FAM160A2Q8N612 972 aaPredicted RBP14.94□□□□□ -0.02
PRIM1-204ENST00000549549 NBPF14Q5TI25 921 aa14.93□□□□□ -0.02
PRIM1-204ENST00000549549 ANKMY2Q8IV38 441 aa14.93□□□□□ -0.02
PRIM1-204ENST00000549549 PCDHB9Q9Y5E1 797 aa14.93□□□□□ -0.02
PRIM1-204ENST00000549549 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
PRIM1-204ENST00000549549 TRAF7Q6Q0C0 670 aa14.92□□□□□ -0.02
PRIM1-204ENST00000549549 NUDT12Q9BQG2 462 aa14.92□□□□□ -0.02
PRIM1-204ENST00000549549 LSM11P83369 360 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRIM1-204ENST00000549549 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms