RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 ANKK1Q8NFD2 765 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 STAC3Q96MF2 364 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 FAM196BA6NMK8 535 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 EMP3P54852 163 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 PPP4CP60510 307 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 PTK2Q05397 1052 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 CCER1Q8TC90 406 aaPredicted RBP6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.31
TSPAN8-204ENST00000549421 GOLGA8CPA6NN73 597 aa6.83□□□□□ -1.32
TSPAN8-204ENST00000549421 ATP5J2-PTCD1G3V325 749 aa6.83□□□□□ -1.32
TSPAN8-204ENST00000549421 MSS51Q4VC12 460 aa6.83□□□□□ -1.32
TSPAN8-204ENST00000549421 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
TSPAN8-204ENST00000549421 POTEEQ6S8J3 1075 aa6.83□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L3A6NCW0 530 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L4A6NCW7 530 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 ERCC3P19447 782 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 MAP7D1Q3KQU3 841 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 SLFNL1Q499Z3 407 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 KANK4Q5T7N3 995 aaPredicted RBP6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L1Q7RTZ2 530 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 AXIN2Q9Y2T1 843 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
TSPAN8-204ENST00000549421 CCNYL3P0C7X3 344 aa6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 SKIP12755 728 aa6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 PUS10Q3MIT2 529 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 TSR3Q9UJK0 312 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-204ENST00000549421 SOWAHBA6NEL2 793 aa6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 CTHP32929 405 aa6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 TRIM50Q86XT4 487 aa6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
TSPAN8-204ENST00000549421 ARID4AP29374 1257 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 ATP1A2P50993 1020 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 ADGRD1Q6QNK2 874 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 BLOC1S3Q6QNY0 202 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 THAP11Q96EK4 314 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 CDCA7Q9BWT1 371 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 HPS5Q9UPZ3 1129 aa6.79□□□□□ -1.32
TSPAN8-204ENST00000549421 E9PSI1 815 aa6.78□□□□□ -1.32
TSPAN8-204ENST00000549421 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
TSPAN8-204ENST00000549421 KCNH2Q12809 1159 aa6.78□□□□□ -1.32
TSPAN8-204ENST00000549421 CDCA8Q53HL2 280 aa6.78□□□□□ -1.32
TSPAN8-204ENST00000549421 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
TSPAN8-204ENST00000549421 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L10C9JJH3 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L21D6R901 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 HRO43593 1189 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 DXOO77932 396 aaKnown RBP6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 MMP16P51512 607 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 SWI5Q1ZZU3 235 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 EML3Q32P44 896 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 TMEM164Q5U3C3 297 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 RNF135Q8IUD6 432 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 NUDT12Q9BQG2 462 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 CEP126Q9P2H0 1117 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 MKRN1Q9UHC7 482 aaKnown RBP6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 ZMIZ1Q9ULJ6 1067 aa6.77□□□□□ -1.33
TSPAN8-204ENST00000549421 RBM25P49756 843 aaKnown RBP6.76□□□□□ -1.33
TSPAN8-204ENST00000549421 PLPP7Q8NBV4 271 aa6.76□□□□□ -1.33
TSPAN8-204ENST00000549421 CLP1Q92989 425 aaKnown RBP6.76□□□□□ -1.33
TSPAN8-204ENST00000549421 OTUD5Q96G74 571 aa6.76□□□□□ -1.33
TSPAN8-204ENST00000549421 CHIC2Q9UKJ5 165 aa6.76□□□□□ -1.33
TSPAN8-204ENST00000549421 FAM205CA6NFA0 338 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 ST18O60284 1047 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 RASA1P20936 1047 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 APLP1P51693 650 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 TRIM52Q96A61 297 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 SIRT1Q96EB6 747 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 SPSB2Q99619 263 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 ARHGAP9Q9BRR9 750 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 NOD1Q9Y239 953 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 PCDHB9Q9Y5E1 797 aa6.75□□□□□ -1.33
TSPAN8-204ENST00000549421 PTK7Q13308 1070 aa6.74□□□□□ -1.33
TSPAN8-204ENST00000549421 NCOA4Q13772 614 aa6.74□□□□□ -1.33
TSPAN8-204ENST00000549421 ZBTB33Q86T24 672 aa6.74□□□□□ -1.33
TSPAN8-204ENST00000549421 ANKMY2Q8IV38 441 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms