RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 ITGAEP38570 1179 aa11.56□□□□□ -0.56
LETMD1-219ENST00000549395 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
LETMD1-219ENST00000549395 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
LETMD1-219ENST00000549395 TMEM132EQ6IEE7 984 aa11.55□□□□□ -0.56
LETMD1-219ENST00000549395 SPATA31A1Q5TZJ5 1347 aa11.55□□□□□ -0.56
LETMD1-219ENST00000549395 TRPM3Q9HCF6 1732 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-219ENST00000549395 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
LETMD1-219ENST00000549395 PMFBP1Q8TBY8 1022 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 MYOM1P52179 1685 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
LETMD1-219ENST00000549395 CRYBG1Q9Y4K1 1723 aa11.53□□□□□ -0.56
LETMD1-219ENST00000549395 PDE3BQ13370 1112 aa11.52□□□□□ -0.57
LETMD1-219ENST00000549395 STRN4Q9NRL3 753 aa11.52□□□□□ -0.57
LETMD1-219ENST00000549395 PDGFDQ9GZP0 370 aaPredicted RBP11.51□□□□□ -0.57
LETMD1-219ENST00000549395 PRDM11Q9NQV5 511 aa11.51□□□□□ -0.57
LETMD1-219ENST00000549395 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
LETMD1-219ENST00000549395 ZBTB7AO95365 584 aa11.5□□□□□ -0.57
LETMD1-219ENST00000549395 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
LETMD1-219ENST00000549395 PTGER2P43116 358 aa11.49□□□□□ -0.57
LETMD1-219ENST00000549395 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
LETMD1-219ENST00000549395 SYT17Q9BSW7 474 aa11.49□□□□□ -0.57
LETMD1-219ENST00000549395 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
LETMD1-219ENST00000549395 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-219ENST00000549395 SAFB2Q14151 953 aaKnown RBP eCLIP11.48□□□□□ -0.57
LETMD1-219ENST00000549395 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-219ENST00000549395 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-219ENST00000549395 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-219ENST00000549395 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
LETMD1-219ENST00000549395 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
LETMD1-219ENST00000549395 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
LETMD1-219ENST00000549395 SBF2Q86WG5 1849 aa11.46□□□□□ -0.57
LETMD1-219ENST00000549395 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
LETMD1-219ENST00000549395 RGL3Q3MIN7 710 aa11.46□□□□□ -0.57
LETMD1-219ENST00000549395 SIRT1Q96EB6 747 aa11.46□□□□□ -0.57
LETMD1-219ENST00000549395 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
LETMD1-219ENST00000549395 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
LETMD1-219ENST00000549395 PHRF1Q9P1Y6 1649 aaKnown RBP11.45□□□□□ -0.58
LETMD1-219ENST00000549395 ANKARQ7Z5J8 1434 aa11.44□□□□□ -0.58
LETMD1-219ENST00000549395 EVA1CP58658 441 aa11.44□□□□□ -0.58
LETMD1-219ENST00000549395 ZC3H6P61129 1189 aaKnown RBP11.44□□□□□ -0.58
LETMD1-219ENST00000549395 PRAM1Q96QH2 718 aa11.44□□□□□ -0.58
LETMD1-219ENST00000549395 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-219ENST00000549395 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
LETMD1-219ENST00000549395 PIK3C2GO75747 1445 aa11.43□□□□□ -0.58
LETMD1-219ENST00000549395 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
LETMD1-219ENST00000549395 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
LETMD1-219ENST00000549395 PLSCR1O15162 318 aa11.43□□□□□ -0.58
LETMD1-219ENST00000549395 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
LETMD1-219ENST00000549395 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
LETMD1-219ENST00000549395 ANKRD30BQ9BXX2 1392 aa11.42□□□□□ -0.58
LETMD1-219ENST00000549395 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
LETMD1-219ENST00000549395 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
LETMD1-219ENST00000549395 PROM2Q8N271 834 aa11.41□□□□□ -0.58
LETMD1-219ENST00000549395 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
LETMD1-219ENST00000549395 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 GPR162Q16538 588 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 NGDNQ8NEJ9 315 aaKnown RBP11.4□□□□□ -0.58
LETMD1-219ENST00000549395 SGIP1Q9BQI5 828 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
LETMD1-219ENST00000549395 POGKQ9P215 609 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
LETMD1-219ENST00000549395 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.59
LETMD1-219ENST00000549395 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
LETMD1-219ENST00000549395 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
LETMD1-219ENST00000549395 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
LETMD1-219ENST00000549395 C14orf93Q9H972 538 aaKnown RBP11.39□□□□□ -0.59
LETMD1-219ENST00000549395 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
LETMD1-219ENST00000549395 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
LETMD1-219ENST00000549395 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
LETMD1-219ENST00000549395 ARXQ96QS3 562 aa11.38□□□□□ -0.59
LETMD1-219ENST00000549395 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
LETMD1-219ENST00000549395 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
LETMD1-219ENST00000549395 TULP4Q9NRJ4 1543 aa11.37□□□□□ -0.59
LETMD1-219ENST00000549395 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
LETMD1-219ENST00000549395 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
LETMD1-219ENST00000549395 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
LETMD1-219ENST00000549395 ATP7BP35670 1465 aa11.36□□□□□ -0.59
LETMD1-219ENST00000549395 TXNRD1Q16881 649 aa11.35□□□□□ -0.59
LETMD1-219ENST00000549395 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
LETMD1-219ENST00000549395 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
LETMD1-219ENST00000549395 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
LETMD1-219ENST00000549395 AKAP12Q02952 1782 aa11.35□□□□□ -0.59
LETMD1-219ENST00000549395 ITSN1Q15811 1721 aa11.35□□□□□ -0.59
LETMD1-219ENST00000549395 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
LETMD1-219ENST00000549395 DDB1Q16531 1140 aa11.34□□□□□ -0.59
LETMD1-219ENST00000549395 COL5A2P05997 1499 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-219ENST00000549395 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
LETMD1-219ENST00000549395 CPDO75976 1380 aa11.32□□□□□ -0.6
LETMD1-219ENST00000549395 PPARGC1BQ86YN6 1023 aaKnown RBP11.32□□□□□ -0.6
LETMD1-219ENST00000549395 TRAK1Q9UPV9 953 aa11.32□□□□□ -0.6
LETMD1-219ENST00000549395 CRB1P82279 1406 aa11.32□□□□□ -0.6
LETMD1-219ENST00000549395 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
LETMD1-219ENST00000549395 HSPA6P17066 643 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms