RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TRIM37O94972 964 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 YY1P25490 414 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 NRAPQ86VF7 1730 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 DISP2A7MBM2 1401 aa16.15■□□□□ 0.18
TRAFD1-206ENST00000549358 POGKQ9P215 609 aa16.15■□□□□ 0.18
TRAFD1-206ENST00000549358 APBA3O96018 575 aa16.14■□□□□ 0.17
TRAFD1-206ENST00000549358 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-206ENST00000549358 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
TRAFD1-206ENST00000549358 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
TRAFD1-206ENST00000549358 COL14A1Q05707 1796 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-206ENST00000549358 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
TRAFD1-206ENST00000549358 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
TRAFD1-206ENST00000549358 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
TRAFD1-206ENST00000549358 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
TRAFD1-206ENST00000549358 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
TRAFD1-206ENST00000549358 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
TRAFD1-206ENST00000549358 SPATA31A1Q5TZJ5 1347 aa16.11■□□□□ 0.17
TRAFD1-206ENST00000549358 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-206ENST00000549358 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-206ENST00000549358 THSD7AQ9UPZ6 1657 aa16.09■□□□□ 0.17
TRAFD1-206ENST00000549358 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-206ENST00000549358 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
TRAFD1-206ENST00000549358 USP35Q9P2H5 1018 aa16.09■□□□□ 0.17
TRAFD1-206ENST00000549358 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.17
TRAFD1-206ENST00000549358 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
TRAFD1-206ENST00000549358 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
TRAFD1-206ENST00000549358 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
TRAFD1-206ENST00000549358 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
TRAFD1-206ENST00000549358 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 ADGRB2O60241 1585 aa16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 ALS2Q96Q42 1657 aa16.07■□□□□ 0.16
TRAFD1-206ENST00000549358 KIAA0232Q92628 1395 aa16.06■□□□□ 0.16
TRAFD1-206ENST00000549358 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
TRAFD1-206ENST00000549358 PPP1R1BQ9UD71 204 aaPredicted RBP16.06■□□□□ 0.16
TRAFD1-206ENST00000549358 EVA1CP58658 441 aa16.05■□□□□ 0.16
TRAFD1-206ENST00000549358 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-206ENST00000549358 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
TRAFD1-206ENST00000549358 SPON1Q9HCB6 807 aa16.04■□□□□ 0.16
TRAFD1-206ENST00000549358 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
TRAFD1-206ENST00000549358 EIF3AQ14152 1382 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-206ENST00000549358 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
TRAFD1-206ENST00000549358 KCNQ2O43526 872 aa16.02■□□□□ 0.16
TRAFD1-206ENST00000549358 BARGINQ6ZT62 677 aa16.01■□□□□ 0.15
TRAFD1-206ENST00000549358 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
TRAFD1-206ENST00000549358 TULP4Q9NRJ4 1543 aa16■□□□□ 0.15
TRAFD1-206ENST00000549358 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
TRAFD1-206ENST00000549358 RREB1Q92766 1687 aa15.99■□□□□ 0.15
TRAFD1-206ENST00000549358 NUP188Q5SRE5 1749 aa15.98■□□□□ 0.15
TRAFD1-206ENST00000549358 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
TRAFD1-206ENST00000549358 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
TRAFD1-206ENST00000549358 ADGRB1O14514 1584 aa15.97■□□□□ 0.15
TRAFD1-206ENST00000549358 SSH2Q76I76 1423 aa15.97■□□□□ 0.15
TRAFD1-206ENST00000549358 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
TRAFD1-206ENST00000549358 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
TRAFD1-206ENST00000549358 ABTB2Q8N961 1025 aa15.94■□□□□ 0.14
TRAFD1-206ENST00000549358 CAMTA1Q9Y6Y1 1673 aa15.94■□□□□ 0.14
TRAFD1-206ENST00000549358 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
TRAFD1-206ENST00000549358 DCAF11Q8TEB1 546 aa15.93■□□□□ 0.14
TRAFD1-206ENST00000549358 THRAP3Q9Y2W1 955 aaKnown RBP15.93■□□□□ 0.14
TRAFD1-206ENST00000549358 ATP7BP35670 1465 aa15.92■□□□□ 0.14
TRAFD1-206ENST00000549358 CDK19Q9BWU1 502 aa15.92■□□□□ 0.14
TRAFD1-206ENST00000549358 ACEP12821 1306 aa15.92■□□□□ 0.14
TRAFD1-206ENST00000549358 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
TRAFD1-206ENST00000549358 PDGFDQ9GZP0 370 aaPredicted RBP15.91■□□□□ 0.14
TRAFD1-206ENST00000549358 PLSCR1O15162 318 aa15.9■□□□□ 0.14
TRAFD1-206ENST00000549358 CPDO75976 1380 aa15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 ZBTB7AO95365 584 aa15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
TRAFD1-206ENST00000549358 POLR3AO14802 1390 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-206ENST00000549358 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
TRAFD1-206ENST00000549358 GCP02774 474 aa15.88■□□□□ 0.13
TRAFD1-206ENST00000549358 PTF1AQ7RTS3 328 aa15.88■□□□□ 0.13
TRAFD1-206ENST00000549358 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-206ENST00000549358 PLEKHG3A1L390 1219 aa15.87■□□□□ 0.13
TRAFD1-206ENST00000549358 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
TRAFD1-206ENST00000549358 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-206ENST00000549358 ITSN1Q15811 1721 aa15.87■□□□□ 0.13
TRAFD1-206ENST00000549358 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
TRAFD1-206ENST00000549358 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 OVOS2A0A0J9YW53 1432 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 OVOS2Q6IE36 1432 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 DDB1Q16531 1140 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 USP19O94966 1318 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
TRAFD1-206ENST00000549358 COL5A2P05997 1499 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-206ENST00000549358 PTGER2P43116 358 aa15.85■□□□□ 0.13
TRAFD1-206ENST00000549358 PROM2Q8N271 834 aa15.85■□□□□ 0.13
TRAFD1-206ENST00000549358 UTRNP46939 3433 aa15.85■□□□□ 0.13
TRAFD1-206ENST00000549358 CRB1P82279 1406 aa15.85■□□□□ 0.13
TRAFD1-206ENST00000549358 SENP3-EIF4A1A0A087X0R7 540 aa15.84■□□□□ 0.13
TRAFD1-206ENST00000549358 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-206ENST00000549358 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms