RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 MDM2Q00987 491 aaPredicted RBP6.74□□□□□ -1.33
CEP290-204ENST00000547926 ZIC2O95409 532 aaPredicted RBP6.73□□□□□ -1.33
CEP290-204ENST00000547926 CCNYL3P0C7X3 344 aa6.73□□□□□ -1.33
CEP290-204ENST00000547926 ZNF511Q8NB15 262 aa6.73□□□□□ -1.33
CEP290-204ENST00000547926 RETREG3Q86VR2 466 aa6.73□□□□□ -1.33
CEP290-204ENST00000547926 COL25A1Q9BXS0 654 aaPredicted RBP6.73□□□□□ -1.33
CEP290-204ENST00000547926 AMER1Q5JTC6 1135 aaPredicted RBP6.72□□□□□ -1.33
CEP290-204ENST00000547926 EVA1BQ9NVM1 165 aa6.71□□□□□ -1.33
CEP290-204ENST00000547926 MS4A1P11836 297 aa6.71□□□□□ -1.34
CEP290-204ENST00000547926 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
CEP290-204ENST00000547926 ITGB2P05107 769 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 ARID5BQ14865 1188 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 DNMT3AQ9Y6K1 912 aaPredicted RBP6.7□□□□□ -1.34
CEP290-204ENST00000547926 SOS2Q07890 1332 aaPredicted RBP6.7□□□□□ -1.34
CEP290-204ENST00000547926 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 BMP2P12643 396 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 FOXJ1Q92949 421 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
CEP290-204ENST00000547926 VARSP26640 1264 aaKnown RBP6.69□□□□□ -1.34
CEP290-204ENST00000547926 USP46P62068 366 aa6.69□□□□□ -1.34
CEP290-204ENST00000547926 C6orf229H3BNL8 230 aa6.68□□□□□ -1.34
CEP290-204ENST00000547926 GRM5P41594 1212 aa6.68□□□□□ -1.34
CEP290-204ENST00000547926 C4orf48Q5BLP8 95 aa6.68□□□□□ -1.34
CEP290-204ENST00000547926 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
CEP290-204ENST00000547926 MPNDQ8N594 471 aa6.68□□□□□ -1.34
CEP290-204ENST00000547926 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
CEP290-204ENST00000547926 PLEKHG3A1L390 1219 aa6.67□□□□□ -1.34
CEP290-204ENST00000547926 PTSQ03393 145 aa6.67□□□□□ -1.34
CEP290-204ENST00000547926 KCNH2Q12809 1159 aa6.67□□□□□ -1.34
CEP290-204ENST00000547926 RNF225M0QZC1 329 aaPredicted RBP6.67□□□□□ -1.34
CEP290-204ENST00000547926 ADAM23O75077 832 aa6.67□□□□□ -1.34
CEP290-204ENST00000547926 FIGNL2A6NMB9 653 aa6.66□□□□□ -1.34
CEP290-204ENST00000547926 NDUFV2P19404 249 aa6.66□□□□□ -1.34
CEP290-204ENST00000547926 PTPRNQ16849 979 aa6.66□□□□□ -1.34
CEP290-204ENST00000547926 FDX1P10109 184 aa6.65□□□□□ -1.34
CEP290-204ENST00000547926 MEIOBQ8N635 442 aa6.65□□□□□ -1.34
CEP290-204ENST00000547926 CDK15Q96Q40 435 aa6.65□□□□□ -1.34
CEP290-204ENST00000547926 GPIHBP1Q8IV16 184 aa6.64□□□□□ -1.35
CEP290-204ENST00000547926 SLURP2P0DP57 97 aa6.64□□□□□ -1.35
CEP290-204ENST00000547926 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
CEP290-204ENST00000547926 P3H3Q8IVL6 736 aa6.63□□□□□ -1.35
CEP290-204ENST00000547926 PRR7Q8TB68 274 aa6.63□□□□□ -1.35
CEP290-204ENST00000547926 IRF6O14896 467 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 PLA2G4EQ3MJ16 856 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 LYPD4Q6UWN0 246 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 MAP10Q9P2G4 905 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 IGHA1P01876 353 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 VWA5B2Q8N398 1253 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 CCDC155Q8N6L0 562 aa6.62□□□□□ -1.35
CEP290-204ENST00000547926 SPOCK3Q9BQ16 436 aa6.61□□□□□ -1.35
CEP290-204ENST00000547926 MOXD2PA6NHM9 499 aa6.61□□□□□ -1.35
CEP290-204ENST00000547926 MAP2K5Q13163 448 aa6.61□□□□□ -1.35
CEP290-204ENST00000547926 FAM174AQ8TBP5 190 aa6.61□□□□□ -1.35
CEP290-204ENST00000547926 NANOS1Q8WY41 292 aaKnown RBP6.61□□□□□ -1.35
CEP290-204ENST00000547926 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
CEP290-204ENST00000547926 TTLL8A6PVC2 850 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 PROCP04070 461 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 CTHP32929 405 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 CDC14CA4D256 554 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
CEP290-204ENST00000547926 CBLBQ13191 982 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 SMYD5Q6GMV2 418 aa6.59□□□□□ -1.35
CEP290-204ENST00000547926 NR5A1Q13285 461 aa6.58□□□□□ -1.36
CEP290-204ENST00000547926 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.58□□□□□ -1.36
CEP290-204ENST00000547926 SPIRE2Q8WWL2 714 aa6.58□□□□□ -1.36
CEP290-204ENST00000547926 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
CEP290-204ENST00000547926 CNTNAP5Q8WYK1 1306 aa6.58□□□□□ -1.36
CEP290-204ENST00000547926 CCDC102AQ96A19 550 aa6.58□□□□□ -1.36
CEP290-204ENST00000547926 SLC35F4A4IF30 521 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 UPP2O95045 317 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 ADAMTS2O95450 1211 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 FSHRP23945 695 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 DCAF5Q96JK2 942 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 GPCPD1Q9NPB8 672 aa6.57□□□□□ -1.36
CEP290-204ENST00000547926 CFAP99D6REC4 459 aa6.56□□□□□ -1.36
CEP290-204ENST00000547926 MSTNO14793 375 aa6.56□□□□□ -1.36
CEP290-204ENST00000547926 ITGA6P23229 1130 aa6.56□□□□□ -1.36
CEP290-204ENST00000547926 FOXK2Q01167 660 aa6.56□□□□□ -1.36
CEP290-204ENST00000547926 PER1O15534 1290 aaPredicted RBP6.55□□□□□ -1.36
CEP290-204ENST00000547926 SH3RF1Q7Z6J0 888 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 Q8N3U1 123 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 SENP3-EIF4A1A0A087X0R7 540 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 F12P00748 615 aaPredicted RBP6.55□□□□□ -1.36
CEP290-204ENST00000547926 GAS6Q14393 721 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 TSEN34Q9BSV6 310 aaKnown RBP6.55□□□□□ -1.36
CEP290-204ENST00000547926 CUEDC1Q9NWM3 386 aaPredicted RBP6.55□□□□□ -1.36
CEP290-204ENST00000547926 PCDHB15Q9Y5E8 787 aa6.55□□□□□ -1.36
CEP290-204ENST00000547926 CELA2BP08218 269 aaPredicted RBP6.54□□□□□ -1.36
CEP290-204ENST00000547926 AGERQ15109 404 aa6.54□□□□□ -1.36
CEP290-204ENST00000547926 LYPD8Q6UX82 237 aa6.54□□□□□ -1.36
CEP290-204ENST00000547926 SCARF2Q96GP6 870 aaPredicted RBP6.54□□□□□ -1.36
CEP290-204ENST00000547926 CTSOP43234 321 aaPredicted RBP6.53□□□□□ -1.36
CEP290-204ENST00000547926 MTMR2Q13614 643 aa6.53□□□□□ -1.36
CEP290-204ENST00000547926 SPTLC1O15269 473 aa6.53□□□□□ -1.36
CEP290-204ENST00000547926 AGBL1Q96MI9 1066 aa6.53□□□□□ -1.36
CEP290-204ENST00000547926 DESI1Q6ICB0 168 aa6.52□□□□□ -1.37
CEP290-204ENST00000547926 SPINT1O43278 529 aa6.51□□□□□ -1.37
CEP290-204ENST00000547926 CLCN1P35523 988 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms