RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
COPA-207ENST00000545284 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
COPA-207ENST00000545284 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
COPA-207ENST00000545284 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
COPA-207ENST00000545284 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
COPA-207ENST00000545284 TNS1Q9HBL0 1735 aaKnown RBP10.99□□□□□ -0.65
COPA-207ENST00000545284 C14orf93Q9H972 538 aaKnown RBP10.99□□□□□ -0.65
COPA-207ENST00000545284 THRAP3Q9Y2W1 955 aaKnown RBP10.99□□□□□ -0.65
COPA-207ENST00000545284 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
COPA-207ENST00000545284 DHX57Q6P158 1386 aaKnown RBP10.99□□□□□ -0.65
COPA-207ENST00000545284 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
COPA-207ENST00000545284 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
COPA-207ENST00000545284 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
COPA-207ENST00000545284 PPLO60437 1756 aa10.98□□□□□ -0.65
COPA-207ENST00000545284 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
COPA-207ENST00000545284 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
COPA-207ENST00000545284 RGL3Q3MIN7 710 aa10.96□□□□□ -0.65
COPA-207ENST00000545284 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.65
COPA-207ENST00000545284 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
COPA-207ENST00000545284 SPATA31E1Q6ZUB1 1445 aa10.95□□□□□ -0.66
COPA-207ENST00000545284 EVA1CP58658 441 aa10.95□□□□□ -0.66
COPA-207ENST00000545284 PRAM1Q96QH2 718 aa10.95□□□□□ -0.66
COPA-207ENST00000545284 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
COPA-207ENST00000545284 SYT17Q9BSW7 474 aa10.94□□□□□ -0.66
COPA-207ENST00000545284 STRN4Q9NRL3 753 aa10.94□□□□□ -0.66
COPA-207ENST00000545284 POGKQ9P215 609 aa10.94□□□□□ -0.66
COPA-207ENST00000545284 RREB1Q92766 1687 aa10.94□□□□□ -0.66
COPA-207ENST00000545284 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
COPA-207ENST00000545284 PTGER2P43116 358 aa10.93□□□□□ -0.66
COPA-207ENST00000545284 UTRNP46939 3433 aa10.92□□□□□ -0.66
COPA-207ENST00000545284 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
COPA-207ENST00000545284 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
COPA-207ENST00000545284 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
COPA-207ENST00000545284 DLC1Q96QB1 1528 aa10.92□□□□□ -0.66
COPA-207ENST00000545284 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
COPA-207ENST00000545284 NUP188Q5SRE5 1749 aa10.91□□□□□ -0.66
COPA-207ENST00000545284 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
COPA-207ENST00000545284 CPDO75976 1380 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 TRPM3Q9HCF6 1732 aaPredicted RBP10.9□□□□□ -0.66
COPA-207ENST00000545284 WASLO00401 505 aaPredicted RBP10.9□□□□□ -0.66
COPA-207ENST00000545284 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.66
COPA-207ENST00000545284 CHRNA2Q15822 529 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 CFAP70Q5T0N1 1121 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 FHDC1Q9C0D6 1143 aaPredicted RBP10.9□□□□□ -0.66
COPA-207ENST00000545284 MTFR1LQ9H019 292 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
COPA-207ENST00000545284 MAP3K5Q99683 1374 aa10.9□□□□□ -0.67
COPA-207ENST00000545284 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
COPA-207ENST00000545284 ZC3H6P61129 1189 aaKnown RBP10.89□□□□□ -0.67
COPA-207ENST00000545284 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
COPA-207ENST00000545284 BCL9O00512 1426 aa10.89□□□□□ -0.67
COPA-207ENST00000545284 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 ATP7BP35670 1465 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 ZBTB7AO95365 584 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
COPA-207ENST00000545284 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
COPA-207ENST00000545284 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
COPA-207ENST00000545284 PROM2Q8N271 834 aa10.87□□□□□ -0.67
COPA-207ENST00000545284 CDCA7Q9BWT1 371 aaPredicted RBP10.87□□□□□ -0.67
COPA-207ENST00000545284 TULP4Q9NRJ4 1543 aa10.87□□□□□ -0.67
COPA-207ENST00000545284 RGPD3A6NKT7 1758 aaPredicted RBP10.86□□□□□ -0.67
COPA-207ENST00000545284 RGPD4Q7Z3J3 1758 aa10.86□□□□□ -0.67
COPA-207ENST00000545284 DDB1Q16531 1140 aa10.86□□□□□ -0.67
COPA-207ENST00000545284 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
COPA-207ENST00000545284 ATF5Q9Y2D1 282 aaPredicted RBP10.86□□□□□ -0.67
COPA-207ENST00000545284 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
COPA-207ENST00000545284 ARXQ96QS3 562 aa10.85□□□□□ -0.67
COPA-207ENST00000545284 HIRIP3Q9BW71 556 aaPredicted RBP10.85□□□□□ -0.67
COPA-207ENST00000545284 AATKQ6ZMQ8 1374 aa10.85□□□□□ -0.67
COPA-207ENST00000545284 NRKQ7Z2Y5 1582 aa10.85□□□□□ -0.67
COPA-207ENST00000545284 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
COPA-207ENST00000545284 CRB1P82279 1406 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 NUDT16Q96DE0 195 aaKnown RBP10.84□□□□□ -0.67
COPA-207ENST00000545284 MPHOSPH9Q99550 1183 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 PDGFDQ9GZP0 370 aaPredicted RBP10.84□□□□□ -0.67
COPA-207ENST00000545284 POLR3AO14802 1390 aaPredicted RBP10.84□□□□□ -0.67
COPA-207ENST00000545284 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 USP19O94966 1318 aa10.84□□□□□ -0.67
COPA-207ENST00000545284 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 BRD4O60885 1362 aaPredicted RBP10.83□□□□□ -0.68
COPA-207ENST00000545284 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 GCP02774 474 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 GPR162Q16538 588 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 ABTB2Q8N961 1025 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
COPA-207ENST00000545284 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
COPA-207ENST00000545284 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
COPA-207ENST00000545284 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
COPA-207ENST00000545284 COL5A2P05997 1499 aaPredicted RBP10.81□□□□□ -0.68
COPA-207ENST00000545284 GRIN3BO60391 1043 aa10.8□□□□□ -0.68
COPA-207ENST00000545284 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
COPA-207ENST00000545284 ACEP12821 1306 aa10.8□□□□□ -0.68
COPA-207ENST00000545284 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms