RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 FANCIQ9NVI1 1328 aa6.47□□□□□ -1.37
CNGA1-209ENST00000544810 LAMC1P11047 1609 aa6.46□□□□□ -1.37
CNGA1-209ENST00000544810 MYOM2P54296 1465 aa6.46□□□□□ -1.37
CNGA1-209ENST00000544810 SOS2Q07890 1332 aaPredicted RBP6.46□□□□□ -1.38
CNGA1-209ENST00000544810 TMEM131LA2VDJ0 1609 aa6.46□□□□□ -1.38
CNGA1-209ENST00000544810 IL27Q8NEV9 243 aa6.46□□□□□ -1.38
CNGA1-209ENST00000544810 RBM19Q9Y4C8 960 aaKnown RBP6.46□□□□□ -1.38
CNGA1-209ENST00000544810 ADGRL3Q9HAR2 1447 aa6.46□□□□□ -1.38
CNGA1-209ENST00000544810 RALGAPBQ86X10 1494 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 COL22A1Q8NFW1 1626 aaPredicted RBP6.45□□□□□ -1.38
CNGA1-209ENST00000544810 XRN1Q8IZH2 1706 aaKnown RBP6.45□□□□□ -1.38
CNGA1-209ENST00000544810 GLI3P10071 1580 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 SPHKAPQ2M3C7 1700 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 RRP7BPQ9NSQ0 103 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 MYOM3Q5VTT5 1437 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 C1orf167Q5SNV9 1468 aa6.45□□□□□ -1.38
CNGA1-209ENST00000544810 RPRD2Q5VT52 1461 aaKnown RBP6.45□□□□□ -1.38
CNGA1-209ENST00000544810 MNX1P50219 401 aaPredicted RBP6.44□□□□□ -1.38
CNGA1-209ENST00000544810 GCC2Q8IWJ2 1684 aa6.44□□□□□ -1.38
CNGA1-209ENST00000544810 CLEC11AQ9Y240 323 aa6.44□□□□□ -1.38
CNGA1-209ENST00000544810 BAG6P46379 1132 aa6.43□□□□□ -1.38
CNGA1-209ENST00000544810 SP7Q8TDD2 431 aaPredicted RBP6.43□□□□□ -1.38
CNGA1-209ENST00000544810 ABCC5O15440 1437 aa6.43□□□□□ -1.38
CNGA1-209ENST00000544810 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.43□□□□□ -1.38
CNGA1-209ENST00000544810 PPP1R37O75864 691 aa6.42□□□□□ -1.38
CNGA1-209ENST00000544810 R3HDM1Q15032 1099 aaKnown RBP6.42□□□□□ -1.38
CNGA1-209ENST00000544810 CREBZFQ9NS37 354 aa6.42□□□□□ -1.38
CNGA1-209ENST00000544810 MYO5BQ9ULV0 1848 aa6.42□□□□□ -1.38
CNGA1-209ENST00000544810 SEPT12Q8IYM1 358 aa6.42□□□□□ -1.38
CNGA1-209ENST00000544810 SLIT2O94813 1529 aa6.42□□□□□ -1.38
CNGA1-209ENST00000544810 SENP3-EIF4A1A0A087X0R7 540 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 UNC5CLQ8IV45 518 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 NALCNQ8IZF0 1738 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 CROCC2H7BZ55 1655 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 TESPA1A2RU30 521 aaPredicted RBP6.41□□□□□ -1.38
CNGA1-209ENST00000544810 ZMYND10O75800 440 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 CHRM1P11229 460 aaPredicted RBP6.41□□□□□ -1.38
CNGA1-209ENST00000544810 E2F4Q16254 413 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 ORAI2Q96SN7 254 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 SGIP1Q9BQI5 828 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 ARHGEF1Q92888 912 aaKnown RBP6.41□□□□□ -1.38
CNGA1-209ENST00000544810 MFRPQ9BY79 579 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 C1orf115Q9H7X2 142 aa6.41□□□□□ -1.38
CNGA1-209ENST00000544810 NRXN3Q9Y4C0 1643 aa6.4□□□□□ -1.38
CNGA1-209ENST00000544810 KRT27Q7Z3Y8 459 aa6.4□□□□□ -1.38
CNGA1-209ENST00000544810 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.38
CNGA1-209ENST00000544810 METP08581 1390 aa6.4□□□□□ -1.38
CNGA1-209ENST00000544810 EP400Q96L91 3159 aa6.4□□□□□ -1.39
CNGA1-209ENST00000544810 BRWD3Q6RI45 1802 aa6.4□□□□□ -1.39
CNGA1-209ENST00000544810 ZMYND15Q9H091 742 aa6.4□□□□□ -1.39
CNGA1-209ENST00000544810 PXDNQ92626 1479 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 DISP2A7MBM2 1401 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 DAPK1P53355 1430 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 PTPN23Q9H3S7 1636 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 ONECUT3O60422 494 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-209ENST00000544810 EN1Q05925 392 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-209ENST00000544810 MARF1Q9Y4F3 1742 aaKnown RBP6.39□□□□□ -1.39
CNGA1-209ENST00000544810 PCDHB8Q9UN66 801 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 PCDHB13Q9Y5F0 798 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 ANKRD30AQ9BXX3 1397 aa6.39□□□□□ -1.39
CNGA1-209ENST00000544810 VPS72Q15906 364 aa6.38□□□□□ -1.39
CNGA1-209ENST00000544810 UBE2Q2Q8WVN8 375 aa6.38□□□□□ -1.39
CNGA1-209ENST00000544810 NPHP3Q7Z494 1330 aa6.38□□□□□ -1.39
CNGA1-209ENST00000544810 ZNF784Q8NCA9 323 aaPredicted RBP6.38□□□□□ -1.39
CNGA1-209ENST00000544810 ADGRL2O95490 1459 aa6.37□□□□□ -1.39
CNGA1-209ENST00000544810 NINLQ9Y2I6 1382 aa6.37□□□□□ -1.39
CNGA1-209ENST00000544810 PRR29P0C7W0 189 aa6.37□□□□□ -1.39
CNGA1-209ENST00000544810 C1QTNF8P60827 252 aa6.37□□□□□ -1.39
CNGA1-209ENST00000544810 RBM26Q5T8P6 1007 aaKnown RBP6.36□□□□□ -1.39
CNGA1-209ENST00000544810 RSPH6AQ9H0K4 717 aa6.36□□□□□ -1.39
CNGA1-209ENST00000544810 TSPYL2Q9H2G4 693 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-209ENST00000544810 USP32Q8NFA0 1604 aa6.36□□□□□ -1.39
CNGA1-209ENST00000544810 RGPD1P0DJD0 1748 aa6.36□□□□□ -1.39
CNGA1-209ENST00000544810 NEFLP07196 543 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 DEKP35659 375 aaKnown RBP6.35□□□□□ -1.39
CNGA1-209ENST00000544810 ROBO2Q9HCK4 1378 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 PRAG1Q86YV5 1406 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-209ENST00000544810 EZH2Q15910 746 aaKnown RBP6.35□□□□□ -1.39
CNGA1-209ENST00000544810 KDM4CQ9H3R0 1056 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 CHIC2Q9UKJ5 165 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 IQGAP3Q86VI3 1631 aa6.35□□□□□ -1.39
CNGA1-209ENST00000544810 CCDC9Q9Y3X0 531 aaKnown RBP6.34□□□□□ -1.39
CNGA1-209ENST00000544810 ADGRB2O60241 1585 aa6.34□□□□□ -1.39
CNGA1-209ENST00000544810 A0A0G2JS52 829 aa6.34□□□□□ -1.39
CNGA1-209ENST00000544810 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-209ENST00000544810 KRI1Q8N9T8 703 aaKnown RBP6.34□□□□□ -1.39
CNGA1-209ENST00000544810 CAMKK2Q96RR4 588 aa6.34□□□□□ -1.39
CNGA1-209ENST00000544810 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-209ENST00000544810 TNS1Q9HBL0 1735 aaKnown RBP6.34□□□□□ -1.39
CNGA1-209ENST00000544810 PARD3Q8TEW0 1356 aa6.34□□□□□ -1.39
CNGA1-209ENST00000544810 FOXO3O43524 673 aa6.34□□□□□ -1.4
CNGA1-209ENST00000544810 MKRN3Q13064 507 aaKnown RBP6.34□□□□□ -1.4
CNGA1-209ENST00000544810 ESCO1Q5FWF5 840 aa6.34□□□□□ -1.4
CNGA1-209ENST00000544810 SPATA31A3Q5VYP0 1347 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 LRPPRCP42704 1394 aaKnown RBP6.33□□□□□ -1.4
CNGA1-209ENST00000544810 ANKRD50Q9ULJ7 1429 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 CDC42BPGQ6DT37 1551 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 SPON1Q9HCB6 807 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 E9PCH4 1651 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms