RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PLA2G2CQ5R387 149 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 NBPF14Q5TI25 921 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 EPS8L1Q8TE68 723 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 COG6Q9Y2V7 657 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 GPSM3Q9Y4H4 160 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 V9GY48 417 aaPredicted RBP4.86□□□□□ -1.63
YBX3-214ENST00000544501 SLC19A1P41440 591 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 WNT7BP56706 349 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 TRIM32Q13049 653 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 PDXDC2PQ6P474 469 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 C14orf37Q86TY3 774 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 WWC1Q8IX03 1113 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 TBC1D2BQ9UPU7 963 aa4.85□□□□□ -1.63
YBX3-214ENST00000544501 GPR37L1O60883 481 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 LIAT1Q6ZQX7 453 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 ZNF511Q8NB15 262 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 BAP1Q92560 729 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 EMID1Q96A84 441 aaPredicted RBP4.84□□□□□ -1.63
YBX3-214ENST00000544501 ZMYND15Q9H091 742 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 GDPD2Q9HCC8 539 aa4.84□□□□□ -1.63
YBX3-214ENST00000544501 SH3BP2P78314 561 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 PTK2Q05397 1052 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 WASHC4Q2M389 1173 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 SPRYD7Q5W111 196 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 SH3BP5LQ7L8J4 393 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 BPHLQ86WA6 291 aaPredicted RBP4.83□□□□□ -1.64
YBX3-214ENST00000544501 POM121Q96HA1 1249 aa4.83□□□□□ -1.64
YBX3-214ENST00000544501 ZBBXA8MT70 800 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 ABL2P42684 1182 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 IRF5Q13568 498 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 SH3RF1Q7Z6J0 888 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 ZNF598Q86UK7 904 aaKnown RBP4.82□□□□□ -1.64
YBX3-214ENST00000544501 PROSER2Q86WR7 435 aaPredicted RBP4.82□□□□□ -1.64
YBX3-214ENST00000544501 FNBP4Q8N3X1 1017 aaPredicted RBP4.82□□□□□ -1.64
YBX3-214ENST00000544501 ZNF592Q92610 1267 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 CLUAP1Q96AJ1 413 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 PRKD2Q9BZL6 878 aa4.82□□□□□ -1.64
YBX3-214ENST00000544501 VARSP26640 1264 aaKnown RBP4.81□□□□□ -1.64
YBX3-214ENST00000544501 MCCD1P59942 119 aaPredicted RBP4.81□□□□□ -1.64
YBX3-214ENST00000544501 NR1H3Q13133 447 aa4.81□□□□□ -1.64
YBX3-214ENST00000544501 ARHGAP9Q9BRR9 750 aa4.81□□□□□ -1.64
YBX3-214ENST00000544501 ZNF330Q9Y3S2 320 aaPredicted RBP4.81□□□□□ -1.64
YBX3-214ENST00000544501 WNT7AO00755 349 aa4.8□□□□□ -1.64
YBX3-214ENST00000544501 SKOR1P84550 965 aa4.8□□□□□ -1.64
YBX3-214ENST00000544501 AGERQ15109 404 aa4.8□□□□□ -1.64
YBX3-214ENST00000544501 LINC01559Q495D7 138 aa4.8□□□□□ -1.64
YBX3-214ENST00000544501 TIMELESSQ9UNS1 1208 aa4.8□□□□□ -1.64
YBX3-214ENST00000544501 TRAK2O60296 914 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 FBXO45P0C2W1 286 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 SOX11P35716 441 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 EIF4G2P78344 907 aaKnown RBP eCLIP4.79□□□□□ -1.64
YBX3-214ENST00000544501 RC3H1Q5TC82 1133 aaKnown RBP4.79□□□□□ -1.64
YBX3-214ENST00000544501 ZNF697Q5TEC3 545 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 ZBTB33Q86T24 672 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 TRMT44Q8IYL2 757 aaKnown RBP4.79□□□□□ -1.64
YBX3-214ENST00000544501 MPNDQ8N594 471 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 FOXJ1Q92949 421 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 OCSTAMPQ9BR26 566 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 C1QTNF2Q9BXJ5 285 aa4.79□□□□□ -1.64
YBX3-214ENST00000544501 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
YBX3-214ENST00000544501 EHBP1Q8NDI1 1231 aa4.78□□□□□ -1.64
YBX3-214ENST00000544501 FAM174AQ8TBP5 190 aa4.78□□□□□ -1.64
YBX3-214ENST00000544501 ADAM32Q8TC27 787 aa4.78□□□□□ -1.64
YBX3-214ENST00000544501 CDV3Q9UKY7 258 aaKnown RBP4.78□□□□□ -1.64
YBX3-214ENST00000544501 MAGEB6P1A0A0J9YX57 407 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 SIAH2O43255 324 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PRR20EP86478 221 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PRR20CP86479 221 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PRR20DP86480 221 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PRR20BP86481 221 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PRR20AP86496 221 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 VAC14Q08AM6 782 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 ERFEQ4G0M1 354 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 CDK15Q96Q40 435 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 PKD2L1Q9P0L9 805 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 MAP4K5Q9Y4K4 846 aa4.77□□□□□ -1.65
YBX3-214ENST00000544501 GDF9O60383 454 aa4.76□□□□□ -1.65
YBX3-214ENST00000544501 CCDC125Q86Z20 511 aa4.76□□□□□ -1.65
YBX3-214ENST00000544501 SLC10A4Q96EP9 437 aa4.76□□□□□ -1.65
YBX3-214ENST00000544501 MRGPRX2Q96LB1 330 aa4.76□□□□□ -1.65
YBX3-214ENST00000544501 CARD14Q9BXL6 1004 aa4.76□□□□□ -1.65
YBX3-214ENST00000544501 FOXC1Q12948 553 aa4.75□□□□□ -1.65
YBX3-214ENST00000544501 SEMA3FQ13275 785 aa4.75□□□□□ -1.65
YBX3-214ENST00000544501 NBPF20Q3BBV1 942 aa4.75□□□□□ -1.65
YBX3-214ENST00000544501 DZIP3Q86Y13 1208 aaKnown RBP4.75□□□□□ -1.65
YBX3-214ENST00000544501 SNIP1Q8TAD8 396 aaKnown RBP4.75□□□□□ -1.65
YBX3-214ENST00000544501 ALG2Q9H553 416 aa4.75□□□□□ -1.65
YBX3-214ENST00000544501 POM121CA8CG34 1229 aa4.74□□□□□ -1.65
YBX3-214ENST00000544501 TRIM67Q6ZTA4 783 aa4.74□□□□□ -1.65
YBX3-214ENST00000544501 SEPT12Q8IYM1 358 aa4.74□□□□□ -1.65
YBX3-214ENST00000544501 PCDHB9Q9Y5E1 797 aa4.74□□□□□ -1.65
YBX3-214ENST00000544501 ADH1CP00326 375 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 NR5A1Q13285 461 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 HDGFL1Q5TGJ6 251 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 RNF20Q5VTR2 975 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 VASH1Q7L8A9 365 aaPredicted RBP4.73□□□□□ -1.65
YBX3-214ENST00000544501 CYP4X1Q8N118 509 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 TRIM52Q96A61 297 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 KCTD15Q96SI1 283 aaPredicted RBP4.73□□□□□ -1.65
YBX3-214ENST00000544501 TOR4AQ9NXH8 423 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms