RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 ROBO2Q9HCK4 1378 aa13.86□□□□□ -0.19
LDHC-208ENST00000544105 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
LDHC-208ENST00000544105 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
LDHC-208ENST00000544105 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
LDHC-208ENST00000544105 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
LDHC-208ENST00000544105 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
LDHC-208ENST00000544105 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
LDHC-208ENST00000544105 CLCN6P51797 869 aa13.83□□□□□ -0.2
LDHC-208ENST00000544105 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
LDHC-208ENST00000544105 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
LDHC-208ENST00000544105 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 ATP7BP35670 1465 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 KCNA6P17658 529 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 LHX8Q68G74 356 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
LDHC-208ENST00000544105 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
LDHC-208ENST00000544105 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
LDHC-208ENST00000544105 INSRP06213 1382 aa13.8□□□□□ -0.2
LDHC-208ENST00000544105 ADGRB2O60241 1585 aa13.79□□□□□ -0.2
LDHC-208ENST00000544105 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
LDHC-208ENST00000544105 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
LDHC-208ENST00000544105 PLEKHG3A1L390 1219 aa13.77□□□□□ -0.21
LDHC-208ENST00000544105 FYB1O15117 783 aa13.77□□□□□ -0.21
LDHC-208ENST00000544105 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
LDHC-208ENST00000544105 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
LDHC-208ENST00000544105 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
LDHC-208ENST00000544105 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
LDHC-208ENST00000544105 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
LDHC-208ENST00000544105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
LDHC-208ENST00000544105 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
LDHC-208ENST00000544105 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
LDHC-208ENST00000544105 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
LDHC-208ENST00000544105 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
LDHC-208ENST00000544105 POLR3AO14802 1390 aaPredicted RBP13.75□□□□□ -0.21
LDHC-208ENST00000544105 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
LDHC-208ENST00000544105 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
LDHC-208ENST00000544105 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
LDHC-208ENST00000544105 MTHFSP49914 203 aa13.74□□□□□ -0.21
LDHC-208ENST00000544105 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
LDHC-208ENST00000544105 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
LDHC-208ENST00000544105 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 ACEP12821 1306 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
LDHC-208ENST00000544105 COG3Q96JB2 828 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 CDC42BPGQ6DT37 1551 aa13.73□□□□□ -0.21
LDHC-208ENST00000544105 NEFLP07196 543 aa13.72□□□□□ -0.21
LDHC-208ENST00000544105 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
LDHC-208ENST00000544105 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
LDHC-208ENST00000544105 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
LDHC-208ENST00000544105 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
LDHC-208ENST00000544105 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
LDHC-208ENST00000544105 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
LDHC-208ENST00000544105 PNNQ9H307 717 aaKnown RBP13.69□□□□□ -0.22
LDHC-208ENST00000544105 BLMP54132 1417 aaPredicted RBP13.69□□□□□ -0.22
LDHC-208ENST00000544105 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
LDHC-208ENST00000544105 HSPA2P54652 639 aa13.68□□□□□ -0.22
LDHC-208ENST00000544105 NME9Q86XW9 330 aa13.68□□□□□ -0.22
LDHC-208ENST00000544105 KIF20BQ96Q89 1820 aa13.68□□□□□ -0.22
LDHC-208ENST00000544105 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
LDHC-208ENST00000544105 ADGRL3Q9HAR2 1447 aa13.67□□□□□ -0.22
LDHC-208ENST00000544105 USP6P35125 1406 aa13.66□□□□□ -0.22
LDHC-208ENST00000544105 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
LDHC-208ENST00000544105 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
LDHC-208ENST00000544105 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
LDHC-208ENST00000544105 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
LDHC-208ENST00000544105 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
LDHC-208ENST00000544105 TOPAZ1Q8N9V7 1692 aa13.66□□□□□ -0.22
LDHC-208ENST00000544105 MON2Q7Z3U7 1717 aa13.65□□□□□ -0.22
LDHC-208ENST00000544105 PPM1GO15355 546 aaPredicted RBP13.65□□□□□ -0.22
LDHC-208ENST00000544105 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
LDHC-208ENST00000544105 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
LDHC-208ENST00000544105 ATF3P18847 181 aa13.65□□□□□ -0.22
LDHC-208ENST00000544105 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
LDHC-208ENST00000544105 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
LDHC-208ENST00000544105 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
LDHC-208ENST00000544105 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
LDHC-208ENST00000544105 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
LDHC-208ENST00000544105 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
LDHC-208ENST00000544105 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
LDHC-208ENST00000544105 NEFMP07197 916 aa13.64□□□□□ -0.23
LDHC-208ENST00000544105 PSME1Q06323 249 aa13.64□□□□□ -0.23
LDHC-208ENST00000544105 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
LDHC-208ENST00000544105 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
LDHC-208ENST00000544105 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
LDHC-208ENST00000544105 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
LDHC-208ENST00000544105 POLKQ9UBT6 870 aa13.63□□□□□ -0.23
LDHC-208ENST00000544105 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
LDHC-208ENST00000544105 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
LDHC-208ENST00000544105 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
LDHC-208ENST00000544105 APAF1O14727 1248 aa13.61□□□□□ -0.23
LDHC-208ENST00000544105 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
LDHC-208ENST00000544105 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
LDHC-208ENST00000544105 NLRP6P59044 892 aa13.6□□□□□ -0.23
LDHC-208ENST00000544105 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
LDHC-208ENST00000544105 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
LDHC-208ENST00000544105 PNPLA6Q8IY17 1366 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms