RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 DHX8Q14562 1220 aaKnown RBP16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 CCP110O43303 1012 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 CCDC112Q8NEF3 446 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
MAP3K4-215ENST00000544041 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
MAP3K4-215ENST00000544041 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
MAP3K4-215ENST00000544041 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
MAP3K4-215ENST00000544041 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
MAP3K4-215ENST00000544041 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
MAP3K4-215ENST00000544041 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
MAP3K4-215ENST00000544041 SPC24Q8NBT2 197 aa16.4■□□□□ 0.22
MAP3K4-215ENST00000544041 TMEM132EQ6IEE7 984 aa16.4■□□□□ 0.22
MAP3K4-215ENST00000544041 GNAI2P04899 355 aa16.39■□□□□ 0.21
MAP3K4-215ENST00000544041 CLCN1P35523 988 aa16.39■□□□□ 0.21
MAP3K4-215ENST00000544041 TRDNQ13061 729 aa16.39■□□□□ 0.21
MAP3K4-215ENST00000544041 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
MAP3K4-215ENST00000544041 HIP1O00291 1037 aa16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
MAP3K4-215ENST00000544041 KRT85P78386 507 aa16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 MCM5P33992 734 aa16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
MAP3K4-215ENST00000544041 SYCE3A1L190 88 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
MAP3K4-215ENST00000544041 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
MAP3K4-215ENST00000544041 AK7Q96M32 723 aa16.35■□□□□ 0.21
MAP3K4-215ENST00000544041 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
MAP3K4-215ENST00000544041 PRG4Q92954 1404 aaPredicted RBP16.35■□□□□ 0.21
MAP3K4-215ENST00000544041 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 MPNDQ8N594 471 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 CLSTN1O94985 981 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 ANKRD1Q15327 319 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.217e-8■■□□□ 13.9
MAP3K4-215ENST00000544041 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 SMC2O95347 1197 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
MAP3K4-215ENST00000544041 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.21
MAP3K4-215ENST00000544041 RUFY1Q96T51 708 aa16.33■□□□□ 0.2
MAP3K4-215ENST00000544041 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
MAP3K4-215ENST00000544041 RALYLQ86SE5 291 aaKnown RBP16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 FOSBP53539 338 aa16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 GAS2L2Q8NHY3 880 aa16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 SSFA2P28290 1259 aa16.32■□□□□ 0.2
MAP3K4-215ENST00000544041 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 FCHSD2O94868 740 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 KLHL40Q2TBA0 621 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.28e-6■□□□□ 10.2
MAP3K4-215ENST00000544041 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 PDILTQ8N807 584 aa16.31■□□□□ 0.2
MAP3K4-215ENST00000544041 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 ABCC5O15440 1437 aa16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 LEKR1Q6ZMV7 388 aa16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 APPP05067 770 aa16.3■□□□□ 0.2
MAP3K4-215ENST00000544041 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 IGHDP01880 384 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 DYNC1I1O14576 645 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
MAP3K4-215ENST00000544041 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
MAP3K4-215ENST00000544041 MARCH6O60337 910 aa16.28■□□□□ 0.2
MAP3K4-215ENST00000544041 CDR1P51861 262 aa16.28■□□□□ 0.2
MAP3K4-215ENST00000544041 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms