RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
SRGAP1-205ENST00000542841 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
SRGAP1-205ENST00000542841 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
SRGAP1-205ENST00000542841 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
SRGAP1-205ENST00000542841 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
SRGAP1-205ENST00000542841 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
SRGAP1-205ENST00000542841 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
SRGAP1-205ENST00000542841 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
SRGAP1-205ENST00000542841 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
SRGAP1-205ENST00000542841 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
SRGAP1-205ENST00000542841 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 ALS2Q96Q42 1657 aa16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 CAMKK2Q96RR4 588 aa16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
SRGAP1-205ENST00000542841 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
SRGAP1-205ENST00000542841 TRIM37O94972 964 aa16.59■□□□□ 0.25
SRGAP1-205ENST00000542841 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
SRGAP1-205ENST00000542841 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
SRGAP1-205ENST00000542841 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
SRGAP1-205ENST00000542841 SPATA31A1Q5TZJ5 1347 aa16.58■□□□□ 0.24
SRGAP1-205ENST00000542841 PARD3Q8TEW0 1356 aa16.58■□□□□ 0.24
SRGAP1-205ENST00000542841 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
SRGAP1-205ENST00000542841 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
SRGAP1-205ENST00000542841 APBA3O96018 575 aa16.57■□□□□ 0.24
SRGAP1-205ENST00000542841 TULP4Q9NRJ4 1543 aa16.56■□□□□ 0.24
SRGAP1-205ENST00000542841 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
SRGAP1-205ENST00000542841 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
SRGAP1-205ENST00000542841 YY1P25490 414 aa16.55■□□□□ 0.24
SRGAP1-205ENST00000542841 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
SRGAP1-205ENST00000542841 CHRNA2Q15822 529 aa16.54■□□□□ 0.24
SRGAP1-205ENST00000542841 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
SRGAP1-205ENST00000542841 CRYBG1Q9Y4K1 1723 aa16.53■□□□□ 0.24
SRGAP1-205ENST00000542841 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
SRGAP1-205ENST00000542841 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
SRGAP1-205ENST00000542841 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
SRGAP1-205ENST00000542841 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
SRGAP1-205ENST00000542841 EVA1CP58658 441 aa16.52■□□□□ 0.24
SRGAP1-205ENST00000542841 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
SRGAP1-205ENST00000542841 BARGINQ6ZT62 677 aa16.51■□□□□ 0.23
SRGAP1-205ENST00000542841 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
SRGAP1-205ENST00000542841 SIN3AQ96ST3 1273 aa16.5■□□□□ 0.23
SRGAP1-205ENST00000542841 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
SRGAP1-205ENST00000542841 ATP7BP35670 1465 aa16.48■□□□□ 0.23
SRGAP1-205ENST00000542841 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
SRGAP1-205ENST00000542841 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
SRGAP1-205ENST00000542841 RREB1Q92766 1687 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 SPON1Q9HCB6 807 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
SRGAP1-205ENST00000542841 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
SRGAP1-205ENST00000542841 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
SRGAP1-205ENST00000542841 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
SRGAP1-205ENST00000542841 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
SRGAP1-205ENST00000542841 KCNQ2O43526 872 aa16.45■□□□□ 0.22
SRGAP1-205ENST00000542841 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
SRGAP1-205ENST00000542841 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
SRGAP1-205ENST00000542841 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
SRGAP1-205ENST00000542841 STAC3Q96MF2 364 aa16.44■□□□□ 0.22
SRGAP1-205ENST00000542841 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
SRGAP1-205ENST00000542841 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
SRGAP1-205ENST00000542841 POLR3AO14802 1390 aaPredicted RBP16.42■□□□□ 0.22
SRGAP1-205ENST00000542841 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
SRGAP1-205ENST00000542841 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
SRGAP1-205ENST00000542841 ACEP12821 1306 aa16.42■□□□□ 0.22
SRGAP1-205ENST00000542841 CPDO75976 1380 aa16.41■□□□□ 0.22
SRGAP1-205ENST00000542841 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
SRGAP1-205ENST00000542841 NRKQ7Z2Y5 1582 aa16.4■□□□□ 0.22
SRGAP1-205ENST00000542841 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
SRGAP1-205ENST00000542841 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
SRGAP1-205ENST00000542841 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
SRGAP1-205ENST00000542841 PLSCR1O15162 318 aa16.38■□□□□ 0.21
SRGAP1-205ENST00000542841 GCP02774 474 aa16.38■□□□□ 0.21
SRGAP1-205ENST00000542841 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
SRGAP1-205ENST00000542841 USP19O94966 1318 aa16.38■□□□□ 0.21
SRGAP1-205ENST00000542841 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
SRGAP1-205ENST00000542841 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
SRGAP1-205ENST00000542841 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
SRGAP1-205ENST00000542841 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
SRGAP1-205ENST00000542841 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
SRGAP1-205ENST00000542841 TOPAZ1Q8N9V7 1692 aa16.36■□□□□ 0.21
SRGAP1-205ENST00000542841 CRB1P82279 1406 aa16.36■□□□□ 0.21
SRGAP1-205ENST00000542841 DDB1Q16531 1140 aa16.34■□□□□ 0.21
SRGAP1-205ENST00000542841 L3MBTL2Q969R5 705 aa16.33■□□□□ 0.2
SRGAP1-205ENST00000542841 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
SRGAP1-205ENST00000542841 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
SRGAP1-205ENST00000542841 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
SRGAP1-205ENST00000542841 UTRNP46939 3433 aa16.32■□□□□ 0.2
SRGAP1-205ENST00000542841 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
SRGAP1-205ENST00000542841 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
SRGAP1-205ENST00000542841 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
SRGAP1-205ENST00000542841 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
SRGAP1-205ENST00000542841 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
SRGAP1-205ENST00000542841 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
SRGAP1-205ENST00000542841 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
SRGAP1-205ENST00000542841 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms