RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 MST1RQ04912 1400 aa17.94■□□□□ 0.46
CHFR-221ENST00000542714 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
CHFR-221ENST00000542714 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
CHFR-221ENST00000542714 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
CHFR-221ENST00000542714 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
CHFR-221ENST00000542714 NME9Q86XW9 330 aa17.92■□□□□ 0.46
CHFR-221ENST00000542714 PHF8Q9UPP1 1060 aa17.92■□□□□ 0.46
CHFR-221ENST00000542714 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
CHFR-221ENST00000542714 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
CHFR-221ENST00000542714 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
CHFR-221ENST00000542714 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
CHFR-221ENST00000542714 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
CHFR-221ENST00000542714 TRPM3Q9HCF6 1732 aaPredicted RBP17.9■□□□□ 0.46
CHFR-221ENST00000542714 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
CHFR-221ENST00000542714 TNNT2P45379 298 aaPredicted RBP17.89■□□□□ 0.45
CHFR-221ENST00000542714 MSH6P52701 1360 aa17.89■□□□□ 0.45
CHFR-221ENST00000542714 LTBP4Q8N2S1 1624 aa17.88■□□□□ 0.45
CHFR-221ENST00000542714 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
CHFR-221ENST00000542714 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
CHFR-221ENST00000542714 TTC21AQ8NDW8 1320 aa17.87■□□□□ 0.45
CHFR-221ENST00000542714 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
CHFR-221ENST00000542714 ATF3P18847 181 aa17.86■□□□□ 0.45
CHFR-221ENST00000542714 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
CHFR-221ENST00000542714 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
CHFR-221ENST00000542714 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
CHFR-221ENST00000542714 CADPS2Q86UW7 1296 aa17.84■□□□□ 0.45
CHFR-221ENST00000542714 BLMP54132 1417 aaPredicted RBP17.83■□□□□ 0.45
CHFR-221ENST00000542714 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.45
CHFR-221ENST00000542714 MTHFSP49914 203 aa17.83■□□□□ 0.44
CHFR-221ENST00000542714 COG3Q96JB2 828 aa17.83■□□□□ 0.44
CHFR-221ENST00000542714 ALS2Q96Q42 1657 aa17.83■□□□□ 0.44
CHFR-221ENST00000542714 INSRP06213 1382 aa17.82■□□□□ 0.44
CHFR-221ENST00000542714 PEAK1Q9H792 1746 aa17.82■□□□□ 0.44
CHFR-221ENST00000542714 FBLN1P23142 703 aa17.81■□□□□ 0.44
CHFR-221ENST00000542714 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHFR-221ENST00000542714 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
CHFR-221ENST00000542714 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
CHFR-221ENST00000542714 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
CHFR-221ENST00000542714 FOXO3O43524 673 aa17.78■□□□□ 0.44
CHFR-221ENST00000542714 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
CHFR-221ENST00000542714 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
CHFR-221ENST00000542714 PXDNQ92626 1479 aa17.77■□□□□ 0.44
CHFR-221ENST00000542714 PSME1Q06323 249 aa17.77■□□□□ 0.44
CHFR-221ENST00000542714 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
CHFR-221ENST00000542714 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
CHFR-221ENST00000542714 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
CHFR-221ENST00000542714 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
CHFR-221ENST00000542714 LTN1O94822 1766 aa17.76■□□□□ 0.43
CHFR-221ENST00000542714 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
CHFR-221ENST00000542714 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHFR-221ENST00000542714 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
CHFR-221ENST00000542714 SLIT3O75094 1523 aa17.75■□□□□ 0.43
CHFR-221ENST00000542714 NFAT5O94916 1531 aa17.75■□□□□ 0.43
CHFR-221ENST00000542714 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
CHFR-221ENST00000542714 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
CHFR-221ENST00000542714 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
CHFR-221ENST00000542714 BRINP3Q76B58 766 aa17.74■□□□□ 0.43
CHFR-221ENST00000542714 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
CHFR-221ENST00000542714 NLRP6P59044 892 aa17.73■□□□□ 0.43
CHFR-221ENST00000542714 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
CHFR-221ENST00000542714 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
CHFR-221ENST00000542714 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
CHFR-221ENST00000542714 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
CHFR-221ENST00000542714 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
CHFR-221ENST00000542714 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
CHFR-221ENST00000542714 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
CHFR-221ENST00000542714 RGPD1P0DJD0 1748 aa17.7■□□□□ 0.42
CHFR-221ENST00000542714 SENP3-EIF4A1A0A087X0R7 540 aa17.7■□□□□ 0.42
CHFR-221ENST00000542714 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
CHFR-221ENST00000542714 USP19O94966 1318 aa17.7■□□□□ 0.42
CHFR-221ENST00000542714 ROBO1Q9Y6N7 1651 aa17.69■□□□□ 0.42
CHFR-221ENST00000542714 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
CHFR-221ENST00000542714 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
CHFR-221ENST00000542714 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
CHFR-221ENST00000542714 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
CHFR-221ENST00000542714 SOX12O15370 315 aa17.68■□□□□ 0.42
CHFR-221ENST00000542714 DIAPH1O60610 1272 aaKnown RBP17.68■□□□□ 0.42
CHFR-221ENST00000542714 CCDC146Q8IYE0 955 aa17.67■□□□□ 0.42
CHFR-221ENST00000542714 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
CHFR-221ENST00000542714 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
CHFR-221ENST00000542714 IL13P35225 146 aa17.65■□□□□ 0.42
CHFR-221ENST00000542714 SPATA31A3Q5VYP0 1347 aa17.65■□□□□ 0.42
CHFR-221ENST00000542714 FLT4P35916 1363 aa17.65■□□□□ 0.42
CHFR-221ENST00000542714 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
CHFR-221ENST00000542714 AHDC1Q5TGY3 1603 aaPredicted RBP17.65■□□□□ 0.42
CHFR-221ENST00000542714 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
CHFR-221ENST00000542714 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHFR-221ENST00000542714 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
CHFR-221ENST00000542714 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
CHFR-221ENST00000542714 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
CHFR-221ENST00000542714 RGPD5Q99666 1765 aa17.62■□□□□ 0.41
CHFR-221ENST00000542714 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
CHFR-221ENST00000542714 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
CHFR-221ENST00000542714 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
CHFR-221ENST00000542714 COL18A1P39060 1754 aa17.61■□□□□ 0.41
CHFR-221ENST00000542714 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
CHFR-221ENST00000542714 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
CHFR-221ENST00000542714 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
CHFR-221ENST00000542714 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
CHFR-221ENST00000542714 APAF1O14727 1248 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms