RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
GTDC1-219ENST00000542155 TTC21BQ7Z4L5 1316 aa23.4■■□□□ 1.34
GTDC1-219ENST00000542155 PPP2R1AP30153 589 aa23.39■■□□□ 1.34
GTDC1-219ENST00000542155 FOXO3O43524 673 aa23.39■■□□□ 1.33
GTDC1-219ENST00000542155 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
GTDC1-219ENST00000542155 KIF20BQ96Q89 1820 aa23.38■■□□□ 1.33
GTDC1-219ENST00000542155 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
GTDC1-219ENST00000542155 DDX17Q92841 729 aaKnown RBP23.37■■□□□ 1.33
GTDC1-219ENST00000542155 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
GTDC1-219ENST00000542155 FBLN1P23142 703 aa23.36■■□□□ 1.33
GTDC1-219ENST00000542155 NSD2O96028 1365 aa23.35■■□□□ 1.33
GTDC1-219ENST00000542155 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
GTDC1-219ENST00000542155 NLRP13Q86W25 1043 aa23.34■■□□□ 1.33
GTDC1-219ENST00000542155 ANKRD26Q9UPS8 1709 aa23.33■■□□□ 1.33
GTDC1-219ENST00000542155 PSME1Q06323 249 aa23.33■■□□□ 1.32
GTDC1-219ENST00000542155 BRINP3Q76B58 766 aa23.31■■□□□ 1.32
GTDC1-219ENST00000542155 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
GTDC1-219ENST00000542155 BRD4O60885 1362 aaPredicted RBP23.3■■□□□ 1.32
GTDC1-219ENST00000542155 NUTM2GQ5VZR2 741 aa23.3■■□□□ 1.32
GTDC1-219ENST00000542155 PIK3C2AO00443 1686 aa23.29■■□□□ 1.32
GTDC1-219ENST00000542155 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
GTDC1-219ENST00000542155 KIF1AQ12756 1690 aa23.29■■□□□ 1.32
GTDC1-219ENST00000542155 TTC21AQ8NDW8 1320 aa23.28■■□□□ 1.32
GTDC1-219ENST00000542155 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
GTDC1-219ENST00000542155 COG3Q96JB2 828 aa23.27■■□□□ 1.32
GTDC1-219ENST00000542155 OVOS2A0A0J9YW53 1432 aa23.26■■□□□ 1.31
GTDC1-219ENST00000542155 OVOS2Q6IE36 1432 aa23.26■■□□□ 1.31
GTDC1-219ENST00000542155 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
GTDC1-219ENST00000542155 PNISRQ8TF01 805 aaKnown RBP23.26■■□□□ 1.31
GTDC1-219ENST00000542155 MTHFSP49914 203 aa23.26■■□□□ 1.31
GTDC1-219ENST00000542155 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
GTDC1-219ENST00000542155 TRPM3Q9HCF6 1732 aaPredicted RBP23.24■■□□□ 1.31
GTDC1-219ENST00000542155 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
GTDC1-219ENST00000542155 NLRP6P59044 892 aa23.24■■□□□ 1.31
GTDC1-219ENST00000542155 USP31Q70CQ4 1352 aa23.22■■□□□ 1.31
GTDC1-219ENST00000542155 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
GTDC1-219ENST00000542155 SOX12O15370 315 aa23.21■■□□□ 1.31
GTDC1-219ENST00000542155 POLKQ9UBT6 870 aa23.21■■□□□ 1.31
GTDC1-219ENST00000542155 RRS1Q15050 365 aaKnown RBP23.21■■□□□ 1.31
GTDC1-219ENST00000542155 PXDNQ92626 1479 aa23.2■■□□□ 1.3
GTDC1-219ENST00000542155 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
GTDC1-219ENST00000542155 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
GTDC1-219ENST00000542155 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
GTDC1-219ENST00000542155 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
GTDC1-219ENST00000542155 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
GTDC1-219ENST00000542155 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
GTDC1-219ENST00000542155 AATKQ6ZMQ8 1374 aa23.16■■□□□ 1.3
GTDC1-219ENST00000542155 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
GTDC1-219ENST00000542155 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
GTDC1-219ENST00000542155 ROBO1Q9Y6N7 1651 aa23.14■■□□□ 1.29
GTDC1-219ENST00000542155 SOS2Q07890 1332 aaPredicted RBP23.13■■□□□ 1.29
GTDC1-219ENST00000542155 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
GTDC1-219ENST00000542155 SBNO1A3KN83 1393 aa23.13■■□□□ 1.29
GTDC1-219ENST00000542155 ADAMTS8Q9UP79 889 aa23.12■■□□□ 1.29
GTDC1-219ENST00000542155 SPATA31A3Q5VYP0 1347 aa23.12■■□□□ 1.29
GTDC1-219ENST00000542155 COL3A1P02461 1466 aaPredicted RBP23.11■■□□□ 1.29
GTDC1-219ENST00000542155 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
GTDC1-219ENST00000542155 PNPLA6Q8IY17 1366 aa23.11■■□□□ 1.29
GTDC1-219ENST00000542155 SHPRHQ149N8 1683 aa23.11■■□□□ 1.29
GTDC1-219ENST00000542155 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
GTDC1-219ENST00000542155 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
GTDC1-219ENST00000542155 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
GTDC1-219ENST00000542155 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
GTDC1-219ENST00000542155 PIP4K2BP78356 416 aa23.09■■□□□ 1.29
GTDC1-219ENST00000542155 CABLES1Q8TDN4 633 aa23.09■■□□□ 1.29
GTDC1-219ENST00000542155 CERKQ8TCT0 537 aa23.08■■□□□ 1.29
GTDC1-219ENST00000542155 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
GTDC1-219ENST00000542155 USP19O94966 1318 aa23.07■■□□□ 1.28
GTDC1-219ENST00000542155 TOM1O60784 492 aa23.07■■□□□ 1.28
GTDC1-219ENST00000542155 GCP02774 474 aa23.07■■□□□ 1.28
GTDC1-219ENST00000542155 CFAP53Q96M91 514 aa23.07■■□□□ 1.28
GTDC1-219ENST00000542155 NFAT5O94916 1531 aa23.07■■□□□ 1.28
GTDC1-219ENST00000542155 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
GTDC1-219ENST00000542155 INSRP06213 1382 aa23.06■■□□□ 1.28
GTDC1-219ENST00000542155 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
GTDC1-219ENST00000542155 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
GTDC1-219ENST00000542155 SLIT3O75094 1523 aa23.05■■□□□ 1.28
GTDC1-219ENST00000542155 CDK12Q9NYV4 1490 aaPredicted RBP23.04■■□□□ 1.28
GTDC1-219ENST00000542155 HNRNPUQ00839 825 aaKnown RBP eCLIP23.04■■□□□ 1.28
GTDC1-219ENST00000542155 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
GTDC1-219ENST00000542155 LTN1O94822 1766 aa23.02■■□□□ 1.28
GTDC1-219ENST00000542155 IL13P35225 146 aa23.01■■□□□ 1.27
GTDC1-219ENST00000542155 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
GTDC1-219ENST00000542155 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
GTDC1-219ENST00000542155 CRYBG1Q9Y4K1 1723 aa23■■□□□ 1.27
GTDC1-219ENST00000542155 ARHGEF10O15013 1369 aa23■■□□□ 1.27
GTDC1-219ENST00000542155 AMPHP49418 695 aa23■■□□□ 1.27
GTDC1-219ENST00000542155 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
GTDC1-219ENST00000542155 ZBTB7CA1YPR0 619 aa23■■□□□ 1.27
GTDC1-219ENST00000542155 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
GTDC1-219ENST00000542155 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
GTDC1-219ENST00000542155 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
GTDC1-219ENST00000542155 HOXC9P31274 260 aa22.99■■□□□ 1.27
GTDC1-219ENST00000542155 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
GTDC1-219ENST00000542155 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
GTDC1-219ENST00000542155 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
GTDC1-219ENST00000542155 U2AF1L5P0DN76 240 aaPredicted RBP22.98■■□□□ 1.27
GTDC1-219ENST00000542155 U2AF1Q01081 240 aaKnown RBP eCLIP22.98■■□□□ 1.27
GTDC1-219ENST00000542155 BLMP54132 1417 aaPredicted RBP22.98■■□□□ 1.27
GTDC1-219ENST00000542155 FLT4P35916 1363 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms