RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF330Q9Y3S2 320 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-219ENST00000542112 POTEB3A0JP26 581 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 GOLGA8CPA6NN73 597 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 Q3C1V9 767 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 POTEBQ6S5H4 581 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 CCDC82Q8N4S0 544 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 MAP7D2Q96T17 732 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 PDCL3Q9H2J4 239 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 SERPINA10Q9UK55 444 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 NDUFB9Q9Y6M9 179 aa5.74□□□□□ -1.49
SNHG1-219ENST00000542112 SMARCA2P51531 1590 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 CFAP99D6REC4 459 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 ABL2P42684 1182 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 MORN1Q5T089 497 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 RETREG3Q86VR2 466 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 FTSJ3Q8IY81 847 aaKnown RBP5.73□□□□□ -1.49
SNHG1-219ENST00000542112 CCDC97Q96F63 343 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-219ENST00000542112 IPO9Q96P70 1041 aaKnown RBP5.73□□□□□ -1.49
SNHG1-219ENST00000542112 TBC1D2BQ9UPU7 963 aa5.73□□□□□ -1.49
SNHG1-219ENST00000542112 SOWAHBA6NEL2 793 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 NEFMP07197 916 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 PPP4CP60510 307 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 CTDSPL2Q05D32 466 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 PRR7Q8TB68 274 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 TSC1Q92574 1164 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 GJD4Q96KN9 370 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-219ENST00000542112 PLSCR2Q9NRY7 297 aa5.72□□□□□ -1.49
SNHG1-219ENST00000542112 ATAD2BQ9ULI0 1458 aa5.71□□□□□ -1.49
SNHG1-219ENST00000542112 PTMSP20962 102 aa5.71□□□□□ -1.5
SNHG1-219ENST00000542112 WASHC4Q2M389 1173 aa5.71□□□□□ -1.5
SNHG1-219ENST00000542112 TAF3Q5VWG9 929 aa5.71□□□□□ -1.5
SNHG1-219ENST00000542112 DESI1Q6ICB0 168 aa5.71□□□□□ -1.5
SNHG1-219ENST00000542112 ANKRD13DQ6ZTN6 518 aa5.71□□□□□ -1.5
SNHG1-219ENST00000542112 TSR3Q9UJK0 312 aaKnown RBP5.71□□□□□ -1.5
SNHG1-219ENST00000542112 TPM2P07951 284 aa5.7□□□□□ -1.5
SNHG1-219ENST00000542112 MTERF4Q7Z6M4 381 aaKnown RBP5.7□□□□□ -1.5
SNHG1-219ENST00000542112 PNMA1Q8ND90 353 aa5.7□□□□□ -1.5
SNHG1-219ENST00000542112 PRDM4Q9UKN5 801 aa5.7□□□□□ -1.5
SNHG1-219ENST00000542112 HPS5Q9UPZ3 1129 aa5.7□□□□□ -1.5
SNHG1-219ENST00000542112 SLC27A5Q9Y2P5 690 aa5.7□□□□□ -1.5
SNHG1-219ENST00000542112 HMGXB3Q12766 1538 aa5.69□□□□□ -1.5
SNHG1-219ENST00000542112 NR1I2O75469 434 aa5.69□□□□□ -1.5
SNHG1-219ENST00000542112 PUS10Q3MIT2 529 aaKnown RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 UTP14CQ5TAP6 766 aaKnown RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 SMAP1Q8IYB5 467 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 LRRN4Q8WUT4 740 aa5.69□□□□□ -1.5
SNHG1-219ENST00000542112 SYMPKQ92797 1274 aaKnown RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 WNT2BQ93097 391 aa5.69□□□□□ -1.5
SNHG1-219ENST00000542112 TRIM34Q9BYJ4 488 aa5.69□□□□□ -1.5
SNHG1-219ENST00000542112 HMX1Q9NP08 348 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-219ENST00000542112 EEA1Q15075 1411 aa5.68□□□□□ -1.5
SNHG1-219ENST00000542112 LOC105371045A0A1W2PR82 267 aa5.68□□□□□ -1.5
SNHG1-219ENST00000542112 FMNL1O95466 1100 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-219ENST00000542112 PTMAP06454 111 aaKnown RBP5.68□□□□□ -1.5
SNHG1-219ENST00000542112 CALR3Q96L12 384 aaKnown RBP5.68□□□□□ -1.5
SNHG1-219ENST00000542112 USB1Q9BQ65 265 aaKnown RBP5.68□□□□□ -1.5
SNHG1-219ENST00000542112 CCDC88BA6NC98 1476 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 NCAPD3P42695 1498 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 CLGNO14967 610 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 BCAMP50895 628 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 APLP1P51693 650 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 IRF5Q13568 498 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 AXDND1Q5T1B0 1012 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-219ENST00000542112 PPP4R2Q9NY27 417 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 LAS1LQ9Y4W2 734 aaKnown RBP5.67□□□□□ -1.5
SNHG1-219ENST00000542112 PCDHB3Q9Y5E6 796 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 PRDM2Q13029 1718 aa5.67□□□□□ -1.5
SNHG1-219ENST00000542112 CC2D2AQ9P2K1 1620 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 CCER2I3L3R5 266 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 GTF2E1P29083 439 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-219ENST00000542112 TNNT2P45379 298 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-219ENST00000542112 TERF1P54274 439 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 BRICD5Q6PL45 260 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 LYPD8Q6UX82 237 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 SCUBE3Q8IX30 993 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 GLMNQ92990 594 aa5.66□□□□□ -1.5
SNHG1-219ENST00000542112 POM121CA8CG34 1229 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 GPR37L1O60883 481 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 CLSTN1O94985 981 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 SOX11P35716 441 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 NR6A1Q15406 480 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 L1TD1Q5T7N2 865 aaKnown RBP5.65□□□□□ -1.5
SNHG1-219ENST00000542112 BLOC1S3Q6QNY0 202 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 RNF19BQ6ZMZ0 732 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 NYAP1Q6ZVC0 841 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 DHX37Q8IY37 1157 aaKnown RBP5.65□□□□□ -1.5
SNHG1-219ENST00000542112 TRIM44Q96DX7 344 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-219ENST00000542112 THAP11Q96EK4 314 aa5.65□□□□□ -1.5
SNHG1-219ENST00000542112 WRNQ14191 1432 aaPredicted RBP eCLIP5.65□□□□□ -1.51
SNHG1-219ENST00000542112 GOLGA6L3A6NEY3 463 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 PER1O15534 1290 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-219ENST00000542112 KIF20AO95235 890 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 JUNDP17535 347 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 PTPRNQ16849 979 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 EPS8L1Q8TE68 723 aa5.64□□□□□ -1.51
SNHG1-219ENST00000542112 PNNQ9H307 717 aaKnown RBP5.64□□□□□ -1.51
SNHG1-219ENST00000542112 BAZ1BQ9UIG0 1483 aaKnown RBP5.64□□□□□ -1.51
SNHG1-219ENST00000542112 PPP1R15AO75807 674 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms