RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 FNBP4Q8N3X1 1017 aaPredicted RBP18.32■□□□□ 0.52
AP000439.2-201ENST00000542064 QTRT2Q9H974 415 aaKnown RBP18.32■□□□□ 0.52
AP000439.2-201ENST00000542064 USP21Q9UK80 565 aa18.32■□□□□ 0.52
AP000439.2-201ENST00000542064 NRKQ7Z2Y5 1582 aa18.32■□□□□ 0.52
AP000439.2-201ENST00000542064 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
AP000439.2-201ENST00000542064 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
AP000439.2-201ENST00000542064 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
AP000439.2-201ENST00000542064 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
AP000439.2-201ENST00000542064 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
AP000439.2-201ENST00000542064 RXRBP28702 533 aa18.29■□□□□ 0.52
AP000439.2-201ENST00000542064 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
AP000439.2-201ENST00000542064 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
AP000439.2-201ENST00000542064 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
AP000439.2-201ENST00000542064 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
AP000439.2-201ENST00000542064 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.52
AP000439.2-201ENST00000542064 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
AP000439.2-201ENST00000542064 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.51
AP000439.2-201ENST00000542064 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
AP000439.2-201ENST00000542064 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
AP000439.2-201ENST00000542064 USP6P35125 1406 aa18.25■□□□□ 0.51
AP000439.2-201ENST00000542064 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
AP000439.2-201ENST00000542064 RBM6P78332 1123 aaKnown RBP18.24■□□□□ 0.51
AP000439.2-201ENST00000542064 EP400Q96L91 3159 aa18.24■□□□□ 0.51
AP000439.2-201ENST00000542064 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
AP000439.2-201ENST00000542064 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
AP000439.2-201ENST00000542064 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 TESK2Q96S53 571 aa18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
AP000439.2-201ENST00000542064 SBNO2Q9Y2G9 1366 aa18.21■□□□□ 0.51
AP000439.2-201ENST00000542064 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
AP000439.2-201ENST00000542064 USP19O94966 1318 aa18.2■□□□□ 0.5
AP000439.2-201ENST00000542064 SLIT3O75094 1523 aa18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 ZC3H6P61129 1189 aaKnown RBP18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
AP000439.2-201ENST00000542064 CAMTA1Q9Y6Y1 1673 aa18.18■□□□□ 0.5
AP000439.2-201ENST00000542064 COL18A1P39060 1754 aa18.18■□□□□ 0.5
AP000439.2-201ENST00000542064 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
AP000439.2-201ENST00000542064 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
AP000439.2-201ENST00000542064 ABTB2Q8N961 1025 aa18.17■□□□□ 0.5
AP000439.2-201ENST00000542064 USP47Q96K76 1375 aa18.17■□□□□ 0.5
AP000439.2-201ENST00000542064 MYOM1P52179 1685 aa18.16■□□□□ 0.5
AP000439.2-201ENST00000542064 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
AP000439.2-201ENST00000542064 VPS72Q15906 364 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 PRDM11Q9NQV5 511 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 TTC21BQ7Z4L5 1316 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 ATAD2Q6PL18 1390 aa18.14■□□□□ 0.49
AP000439.2-201ENST00000542064 NFAT5O94916 1531 aa18.13■□□□□ 0.49
AP000439.2-201ENST00000542064 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
AP000439.2-201ENST00000542064 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
AP000439.2-201ENST00000542064 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
AP000439.2-201ENST00000542064 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
AP000439.2-201ENST00000542064 SOX12O15370 315 aa18.1■□□□□ 0.49
AP000439.2-201ENST00000542064 NME9Q86XW9 330 aa18.1■□□□□ 0.49
AP000439.2-201ENST00000542064 LTN1O94822 1766 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 GCP02774 474 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 NLRP6P59044 892 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 FAM98CQ17RN3 349 aaKnown RBP18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
AP000439.2-201ENST00000542064 COL5A2P05997 1499 aaPredicted RBP18.08■□□□□ 0.49
AP000439.2-201ENST00000542064 CPDO75976 1380 aa18.08■□□□□ 0.49
AP000439.2-201ENST00000542064 SPATA31A5Q5VU36 1347 aa18.08■□□□□ 0.49
AP000439.2-201ENST00000542064 SPATA31A7Q8IWB4 1347 aa18.08■□□□□ 0.49
AP000439.2-201ENST00000542064 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
AP000439.2-201ENST00000542064 FAM182BQ5T319 152 aa18.08■□□□□ 0.48
AP000439.2-201ENST00000542064 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
AP000439.2-201ENST00000542064 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
AP000439.2-201ENST00000542064 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
AP000439.2-201ENST00000542064 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
AP000439.2-201ENST00000542064 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
AP000439.2-201ENST00000542064 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
AP000439.2-201ENST00000542064 SPATA31A1Q5TZJ5 1347 aa18.04■□□□□ 0.48
AP000439.2-201ENST00000542064 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
AP000439.2-201ENST00000542064 ONECUT3O60422 494 aaPredicted RBP18.03■□□□□ 0.48
AP000439.2-201ENST00000542064 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
AP000439.2-201ENST00000542064 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
AP000439.2-201ENST00000542064 FBLN1P23142 703 aa18.02■□□□□ 0.48
AP000439.2-201ENST00000542064 EDC4Q6P2E9 1401 aaKnown RBP18.02■□□□□ 0.48
AP000439.2-201ENST00000542064 LRRC37A3O60309 1634 aa18.01■□□□□ 0.47
AP000439.2-201ENST00000542064 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
AP000439.2-201ENST00000542064 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
AP000439.2-201ENST00000542064 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
AP000439.2-201ENST00000542064 USP31Q70CQ4 1352 aa18.01■□□□□ 0.47
AP000439.2-201ENST00000542064 A0A0G2JS52 829 aa18■□□□□ 0.47
AP000439.2-201ENST00000542064 MYT1Q01538 1121 aa18■□□□□ 0.47
AP000439.2-201ENST00000542064 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
AP000439.2-201ENST00000542064 PARP4Q9UKK3 1724 aaKnown RBP17.99■□□□□ 0.47
AP000439.2-201ENST00000542064 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
AP000439.2-201ENST00000542064 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
AP000439.2-201ENST00000542064 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms