RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 WASLO00401 505 aaPredicted RBP11.74□□□□□ -0.53
THBS3-211ENST00000541990 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
THBS3-211ENST00000541990 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
THBS3-211ENST00000541990 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
THBS3-211ENST00000541990 A0A1W2PP64 1363 aa11.74□□□□□ -0.53
THBS3-211ENST00000541990 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
THBS3-211ENST00000541990 LAMC1P11047 1609 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 XPCQ01831 940 aaPredicted RBP11.73□□□□□ -0.53
THBS3-211ENST00000541990 NEUROD2Q15784 382 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 NME9Q86XW9 330 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 QRICH2Q9H0J4 1663 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 UBR1Q8IWV7 1749 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
THBS3-211ENST00000541990 MTHFSP49914 203 aa11.72□□□□□ -0.53
THBS3-211ENST00000541990 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
THBS3-211ENST00000541990 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
THBS3-211ENST00000541990 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
THBS3-211ENST00000541990 FYB1O15117 783 aa11.71□□□□□ -0.53
THBS3-211ENST00000541990 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
THBS3-211ENST00000541990 ARHGEF28Q8N1W1 1705 aaKnown RBP11.71□□□□□ -0.53
THBS3-211ENST00000541990 SLFN5Q08AF3 891 aa11.71□□□□□ -0.54
THBS3-211ENST00000541990 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.54
THBS3-211ENST00000541990 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
THBS3-211ENST00000541990 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
THBS3-211ENST00000541990 INSRP06213 1382 aa11.7□□□□□ -0.54
THBS3-211ENST00000541990 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
THBS3-211ENST00000541990 RRS1Q15050 365 aaKnown RBP11.7□□□□□ -0.54
THBS3-211ENST00000541990 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
THBS3-211ENST00000541990 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
THBS3-211ENST00000541990 MYOM1P52179 1685 aa11.69□□□□□ -0.54
THBS3-211ENST00000541990 DDX17Q92841 729 aaKnown RBP11.69□□□□□ -0.54
THBS3-211ENST00000541990 TBX22Q9Y458 520 aa11.69□□□□□ -0.54
THBS3-211ENST00000541990 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
THBS3-211ENST00000541990 APAF1O14727 1248 aa11.68□□□□□ -0.54
THBS3-211ENST00000541990 PANK1Q8TE04 598 aa11.68□□□□□ -0.54
THBS3-211ENST00000541990 CGNL1Q0VF96 1302 aa11.68□□□□□ -0.54
THBS3-211ENST00000541990 KDM5AP29375 1690 aaKnown RBP11.68□□□□□ -0.54
THBS3-211ENST00000541990 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
THBS3-211ENST00000541990 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.67□□□□□ -0.54
THBS3-211ENST00000541990 GZF1Q9H116 711 aaPredicted RBP11.67□□□□□ -0.54
THBS3-211ENST00000541990 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
THBS3-211ENST00000541990 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
THBS3-211ENST00000541990 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
THBS3-211ENST00000541990 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
THBS3-211ENST00000541990 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
THBS3-211ENST00000541990 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
THBS3-211ENST00000541990 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 EMILIN1Q9Y6C2 1016 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
THBS3-211ENST00000541990 ACEP12821 1306 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
THBS3-211ENST00000541990 MYO3AQ8NEV4 1616 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 ANKRD36BQ8N2N9 1353 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
THBS3-211ENST00000541990 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
THBS3-211ENST00000541990 NGDNQ8NEJ9 315 aaKnown RBP11.65□□□□□ -0.54
THBS3-211ENST00000541990 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
THBS3-211ENST00000541990 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
THBS3-211ENST00000541990 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
THBS3-211ENST00000541990 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
THBS3-211ENST00000541990 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
THBS3-211ENST00000541990 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
THBS3-211ENST00000541990 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
THBS3-211ENST00000541990 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
THBS3-211ENST00000541990 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
THBS3-211ENST00000541990 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
THBS3-211ENST00000541990 FOXO3O43524 673 aa11.63□□□□□ -0.55
THBS3-211ENST00000541990 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
THBS3-211ENST00000541990 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
THBS3-211ENST00000541990 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
THBS3-211ENST00000541990 NAP1L5Q96NT1 182 aaPredicted RBP11.63□□□□□ -0.55
THBS3-211ENST00000541990 HMOX1P09601 288 aa11.62□□□□□ -0.55
THBS3-211ENST00000541990 VIRMAQ69YN4 1812 aaKnown RBP11.62□□□□□ -0.55
THBS3-211ENST00000541990 BECN1Q14457 450 aa11.62□□□□□ -0.55
THBS3-211ENST00000541990 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.61□□□□□ -0.55
THBS3-211ENST00000541990 MED14O60244 1454 aa11.61□□□□□ -0.55
THBS3-211ENST00000541990 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
THBS3-211ENST00000541990 SLIT1O75093 1534 aa11.61□□□□□ -0.55
THBS3-211ENST00000541990 RLBP1P12271 317 aa11.6□□□□□ -0.55
THBS3-211ENST00000541990 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
THBS3-211ENST00000541990 PKNOX2Q96KN3 472 aa11.6□□□□□ -0.55
THBS3-211ENST00000541990 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
THBS3-211ENST00000541990 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
THBS3-211ENST00000541990 TBC1D32Q96NH3 1257 aa11.6□□□□□ -0.55
THBS3-211ENST00000541990 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
THBS3-211ENST00000541990 FSD2A1L4K1 749 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 GOLGA6L3A6NEY3 463 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 CPS1P31327 1500 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
THBS3-211ENST00000541990 E9PSI1 815 aa11.58□□□□□ -0.56
THBS3-211ENST00000541990 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
THBS3-211ENST00000541990 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
THBS3-211ENST00000541990 ZNF335Q9H4Z2 1342 aaPredicted RBP11.58□□□□□ -0.56
THBS3-211ENST00000541990 MCM4P33991 863 aa11.58□□□□□ -0.56
THBS3-211ENST00000541990 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
THBS3-211ENST00000541990 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms