RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
NECAP1-205ENST00000541948 GPRASP1Q5JY77 1395 aa11.1□□□□□ -0.63
NECAP1-205ENST00000541948 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
NECAP1-205ENST00000541948 BRWD3Q6RI45 1802 aa11.09□□□□□ -0.63
NECAP1-205ENST00000541948 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
NECAP1-205ENST00000541948 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
NECAP1-205ENST00000541948 ACEP12821 1306 aa11.09□□□□□ -0.63
NECAP1-205ENST00000541948 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
NECAP1-205ENST00000541948 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
NECAP1-205ENST00000541948 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
NECAP1-205ENST00000541948 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
NECAP1-205ENST00000541948 PPIP5K1Q6PFW1 1433 aa11.08□□□□□ -0.64
NECAP1-205ENST00000541948 ROCK2O75116 1388 aaKnown RBP11.07□□□□□ -0.64
NECAP1-205ENST00000541948 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
NECAP1-205ENST00000541948 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
NECAP1-205ENST00000541948 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-205ENST00000541948 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
NECAP1-205ENST00000541948 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
NECAP1-205ENST00000541948 AKAP12Q02952 1782 aa11.06□□□□□ -0.64
NECAP1-205ENST00000541948 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
NECAP1-205ENST00000541948 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
NECAP1-205ENST00000541948 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
NECAP1-205ENST00000541948 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
NECAP1-205ENST00000541948 SSH2Q76I76 1423 aa11.06□□□□□ -0.64
NECAP1-205ENST00000541948 PIK3C2AO00443 1686 aa11.05□□□□□ -0.64
NECAP1-205ENST00000541948 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
NECAP1-205ENST00000541948 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-205ENST00000541948 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
NECAP1-205ENST00000541948 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
NECAP1-205ENST00000541948 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
NECAP1-205ENST00000541948 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
NECAP1-205ENST00000541948 USP6P35125 1406 aa11.03□□□□□ -0.64
NECAP1-205ENST00000541948 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-205ENST00000541948 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
NECAP1-205ENST00000541948 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
NECAP1-205ENST00000541948 MON2Q7Z3U7 1717 aa11.02□□□□□ -0.65
NECAP1-205ENST00000541948 VPS72Q15906 364 aa11.02□□□□□ -0.65
NECAP1-205ENST00000541948 USP19O94966 1318 aa11.02□□□□□ -0.65
NECAP1-205ENST00000541948 KIAA0232Q92628 1395 aa11.02□□□□□ -0.65
NECAP1-205ENST00000541948 CAMTA1Q9Y6Y1 1673 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 COL18A1P39060 1754 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 SLIT3O75094 1523 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
NECAP1-205ENST00000541948 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
NECAP1-205ENST00000541948 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
NECAP1-205ENST00000541948 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
NECAP1-205ENST00000541948 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
NECAP1-205ENST00000541948 ABTB2Q8N961 1025 aa10.99□□□□□ -0.65
NECAP1-205ENST00000541948 TESK2Q96S53 571 aa10.99□□□□□ -0.65
NECAP1-205ENST00000541948 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
NECAP1-205ENST00000541948 EVC2Q86UK5 1308 aa10.99□□□□□ -0.65
NECAP1-205ENST00000541948 RGPD5Q99666 1765 aa10.98□□□□□ -0.65
NECAP1-205ENST00000541948 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 SPATA31A5Q5VU36 1347 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 SPATA31A7Q8IWB4 1347 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 CPDO75976 1380 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 USP54Q70EL1 1684 aa10.97□□□□□ -0.65
NECAP1-205ENST00000541948 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
NECAP1-205ENST00000541948 PCGF6Q9BYE7 350 aa10.96□□□□□ -0.65
NECAP1-205ENST00000541948 NFAT5O94916 1531 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 ST20-MTHFSA0A0A6YYL1 179 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 GCP02774 474 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 FAM98CQ17RN3 349 aaKnown RBP10.95□□□□□ -0.66
NECAP1-205ENST00000541948 FAM182BQ5T319 152 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
NECAP1-205ENST00000541948 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-205ENST00000541948 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-205ENST00000541948 CCDC9Q9Y3X0 531 aaKnown RBP10.94□□□□□ -0.66
NECAP1-205ENST00000541948 EP400Q96L91 3159 aa10.93□□□□□ -0.66
NECAP1-205ENST00000541948 NLRP6P59044 892 aa10.93□□□□□ -0.66
NECAP1-205ENST00000541948 LARP1Q6PKG0 1096 aaKnown RBP10.93□□□□□ -0.66
NECAP1-205ENST00000541948 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
NECAP1-205ENST00000541948 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
NECAP1-205ENST00000541948 WNK3Q9BYP7 1800 aa10.93□□□□□ -0.66
NECAP1-205ENST00000541948 TNS1Q9HBL0 1735 aaKnown RBP10.92□□□□□ -0.66
NECAP1-205ENST00000541948 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
NECAP1-205ENST00000541948 KTN1Q86UP2 1357 aaKnown RBP10.92□□□□□ -0.66
NECAP1-205ENST00000541948 NME9Q86XW9 330 aa10.92□□□□□ -0.66
NECAP1-205ENST00000541948 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
NECAP1-205ENST00000541948 MYOM1P52179 1685 aa10.92□□□□□ -0.66
NECAP1-205ENST00000541948 LTN1O94822 1766 aa10.91□□□□□ -0.66
NECAP1-205ENST00000541948 C1QBPQ07021 282 aaKnown RBP10.91□□□□□ -0.66
NECAP1-205ENST00000541948 KRT27Q7Z3Y8 459 aa10.91□□□□□ -0.66
NECAP1-205ENST00000541948 DEFB132Q7Z7B7 95 aa10.91□□□□□ -0.66
NECAP1-205ENST00000541948 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 USP47Q96K76 1375 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 PARP4Q9UKK3 1724 aaKnown RBP10.9□□□□□ -0.66
NECAP1-205ENST00000541948 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.66
NECAP1-205ENST00000541948 ARHGEF25Q86VW2 580 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
NECAP1-205ENST00000541948 USP35Q9P2H5 1018 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
NECAP1-205ENST00000541948 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms