RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 OLFM4Q6UX06 510 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 C6orf229H3BNL8 230 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 MTHFSP49914 203 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 LRP2BPQ9P2M1 347 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 EEA1Q15075 1411 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 CSPG5O95196 566 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 BEGAINQ9BUH8 593 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 RPGRQ92834 1020 aaKnown RBP7.56□□□□□ -1.2
DMD-228ENST00000541735 PUS7Q96PZ0 661 aaKnown RBP7.56□□□□□ -1.2
DMD-228ENST00000541735 MAP7D2Q96T17 732 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 FEZ1Q99689 392 aa7.56□□□□□ -1.2
DMD-228ENST00000541735 UBA5Q9GZZ9 404 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 SOGA1O94964 1423 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 APAF1O14727 1248 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
DMD-228ENST00000541735 NACADO15069 1562 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 TAX1BP1Q86VP1 789 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 SURF6O75683 361 aaKnown RBP7.55□□□□□ -1.2
DMD-228ENST00000541735 DEKP35659 375 aaKnown RBP7.55□□□□□ -1.2
DMD-228ENST00000541735 TDO2P48775 406 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 PLEKHO1Q53GL0 409 aaPredicted RBP7.55□□□□□ -1.2
DMD-228ENST00000541735 ZKSCAN2Q63HK3 967 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 C8orf37Q96NL8 207 aa7.55□□□□□ -1.2
DMD-228ENST00000541735 ARHGAP35Q9NRY4 1499 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 CCDC57Q2TAC2 916 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 LNPKQ9C0E8 428 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 ERC2O15083 957 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 RALBP1Q15311 655 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 CCDC73Q6ZRK6 1079 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 SDF4Q9BRK5 362 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 CENPHQ9H3R5 247 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 F8W031 263 aaPredicted RBP7.54□□□□□ -1.2
DMD-228ENST00000541735 PLS1Q14651 629 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 TXLNAP40222 546 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 SMARCA2P51531 1590 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 ZNF526Q8TF50 670 aaPredicted RBP7.54□□□□□ -1.2
DMD-228ENST00000541735 ATP6V1DQ9Y5K8 247 aa7.54□□□□□ -1.2
DMD-228ENST00000541735 ANAPC15P60006 121 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 MRPS9P82933 396 aaKnown RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 ACSBG1Q96GR2 724 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 TRIM21P19474 475 aaKnown RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 GPS2Q13227 327 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 DCAF1Q9Y4B6 1507 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 IDH1O75874 414 aaKnown RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 SMC2O95347 1197 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 UQCRHP07919 91 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 PPP4R3AQ6IN85 833 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 MINDY4BA8MYZ0 360 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 KANK4Q5T7N3 995 aaPredicted RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 TNNT1P13805 278 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 ZNF530Q6P9A1 599 aaPredicted RBP7.53□□□□□ -1.2
DMD-228ENST00000541735 RAD54L2Q9Y4B4 1467 aa7.53□□□□□ -1.2
DMD-228ENST00000541735 IGHMBP2P38935 993 aaKnown RBP7.52□□□□□ -1.2
DMD-228ENST00000541735 L3MBTL2Q969R5 705 aa7.52□□□□□ -1.2
DMD-228ENST00000541735 DEF6Q9H4E7 631 aa7.52□□□□□ -1.2
DMD-228ENST00000541735 ZNF771Q7L3S4 317 aaPredicted RBP7.52□□□□□ -1.21
DMD-228ENST00000541735 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
DMD-228ENST00000541735 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
DMD-228ENST00000541735 NOM1Q5C9Z4 860 aaKnown RBP7.51□□□□□ -1.21
DMD-228ENST00000541735 ANKLE2Q86XL3 938 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 SMG6Q86US8 1419 aaKnown RBP7.51□□□□□ -1.21
DMD-228ENST00000541735 DESP17661 470 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
DMD-228ENST00000541735 SPG7Q9UQ90 795 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 PDS5BQ9NTI5 1447 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 MACROD2A1Z1Q3 448 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 FAM177A1Q8N128 213 aaPredicted RBP7.51□□□□□ -1.21
DMD-228ENST00000541735 GJA3Q9Y6H8 435 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 KIF20AO95235 890 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 USHBP1Q8N6Y0 703 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 HOMER2Q9NSB8 354 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 VAT1LQ9HCJ6 419 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 FHAD1B1AJZ9 1412 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 GPTP24298 496 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.51□□□□□ -1.21
DMD-228ENST00000541735 SAMM50Q9Y512 469 aa7.51□□□□□ -1.21
DMD-228ENST00000541735 CDR1P51861 262 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 NFKBIBQ15653 356 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 TAF3Q5VWG9 929 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 DZIP1Q86YF9 867 aaKnown RBP7.5□□□□□ -1.21
DMD-228ENST00000541735 CCDC144AA2RUR9 1427 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 MNS1Q8NEH6 495 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 ARL1P40616 181 aaPredicted RBP7.5□□□□□ -1.21
DMD-228ENST00000541735 ZRSR2Q15696 482 aaKnown RBP7.5□□□□□ -1.21
DMD-228ENST00000541735 NACAP1Q9BZK3 213 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 DPH6Q7L8W6 267 aa7.5□□□□□ -1.21
DMD-228ENST00000541735 CNTROBQ8N137 903 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms