RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-213	ENST00000541329	KCNA6	P17658	529 aa		10.16	□□□□□ -0.78
NPIPB4-213	ENST00000541329	CDC42BPG	Q6DT37	1551 aa		10.16	□□□□□ -0.78
NPIPB4-213	ENST00000541329	ATP7B	P35670	1465 aa		10.16	□□□□□ -0.78
NPIPB4-213	ENST00000541329	POTEA	Q6S8J7	498 aa		10.15	□□□□□ -0.78
NPIPB4-213	ENST00000541329	FMN2	Q9NZ56	1722 aa		10.15	□□□□□ -0.78
NPIPB4-213	ENST00000541329	PIK3R4	Q99570	1358 aa		10.14	□□□□□ -0.79
NPIPB4-213	ENST00000541329	PRR36	Q9H6K5	1346 aa		10.14	□□□□□ -0.79
NPIPB4-213	ENST00000541329	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
NPIPB4-213	ENST00000541329	RBM33	Q96EV2	1170 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-213	ENST00000541329	GGNBP2	Q9H3C7	697 aa		10.14	□□□□□ -0.79
NPIPB4-213	ENST00000541329	NSD2	O96028	1365 aa		10.13	□□□□□ -0.79
NPIPB4-213	ENST00000541329	SHPRH	Q149N8	1683 aa		10.12	□□□□□ -0.79
NPIPB4-213	ENST00000541329	WDR43	Q15061	677 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NPIPB4-213	ENST00000541329	CCDC61	Q9Y6R9	512 aa		10.12	□□□□□ -0.79
NPIPB4-213	ENST00000541329	NKTR	P30414	1462 aa	Known RBP	10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	NWD1	Q149M9	1564 aa		10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	NRK	Q7Z2Y5	1582 aa		10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	SALL2	Q9Y467	1007 aa	Predicted RBP	10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	MAP2	P11137	1827 aa	Known RBP	10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	STRCP1	A6NGW2	1772 aa		10.11	□□□□□ -0.79
NPIPB4-213	ENST00000541329	ZBED9	Q6R2W3	1325 aa		10.1	□□□□□ -0.79
NPIPB4-213	ENST00000541329	CPSF1	Q10570	1443 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-213	ENST00000541329	EDC4	Q6P2E9	1401 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-213	ENST00000541329	FYB1	O15117	783 aa		10.1	□□□□□ -0.79
NPIPB4-213	ENST00000541329	PMFBP1	Q8TBY8	1022 aa		10.1	□□□□□ -0.79
NPIPB4-213	ENST00000541329	BLM	P54132	1417 aa	Predicted RBP	10.09	□□□□□ -0.79
NPIPB4-213	ENST00000541329	C14orf37	Q86TY3	774 aa		10.09	□□□□□ -0.79
NPIPB4-213	ENST00000541329	ZRANB1	Q9UGI0	708 aa		10.09	□□□□□ -0.79
NPIPB4-213	ENST00000541329	ADAMTS8	Q9UP79	889 aa		10.09	□□□□□ -0.79
NPIPB4-213	ENST00000541329	ACE	P12821	1306 aa		10.08	□□□□□ -0.8
NPIPB4-213	ENST00000541329	MTHFS	P49914	203 aa		10.08	□□□□□ -0.8
NPIPB4-213	ENST00000541329	ERICH6	Q7L0X2	663 aa		10.08	□□□□□ -0.8
NPIPB4-213	ENST00000541329	NME9	Q86XW9	330 aa		10.08	□□□□□ -0.8
NPIPB4-213	ENST00000541329	POLR3A	O14802	1390 aa	Predicted RBP	10.07	□□□□□ -0.8
NPIPB4-213	ENST00000541329	PROSER2	Q86WR7	435 aa	Predicted RBP	10.07	□□□□□ -0.8
NPIPB4-213	ENST00000541329	CCDC146	Q8IYE0	955 aa		10.07	□□□□□ -0.8
NPIPB4-213	ENST00000541329	CFAP53	Q96M91	514 aa		10.07	□□□□□ -0.8
NPIPB4-213	ENST00000541329	PLEKHG3	A1L390	1219 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	FBLN1	P23142	703 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	NGDN	Q8NEJ9	315 aa	Known RBP	10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	ZNF692	Q9BU19	519 aa	Predicted RBP	10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	PPP4R2	Q9NY27	417 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	USP6	P35125	1406 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	ANKAR	Q7Z5J8	1434 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	ADGRL3	Q9HAR2	1447 aa		10.06	□□□□□ -0.8
NPIPB4-213	ENST00000541329	TTC21B	Q7Z4L5	1316 aa		10.05	□□□□□ -0.8
NPIPB4-213	ENST00000541329	PIK3C2A	O00443	1686 aa		10.04	□□□□□ -0.8
NPIPB4-213	ENST00000541329	PPM1G	O15355	546 aa	Predicted RBP	10.04	□□□□□ -0.8
NPIPB4-213	ENST00000541329	COG3	Q96JB2	828 aa		10.04	□□□□□ -0.8
NPIPB4-213	ENST00000541329	XIRP1	Q702N8	1843 aa	Known RBP	10.04	□□□□□ -0.8
NPIPB4-213	ENST00000541329	INSR	P06213	1382 aa		10.03	□□□□□ -0.8
NPIPB4-213	ENST00000541329	COL3A1	P02461	1466 aa	Predicted RBP	10.03	□□□□□ -0.8
NPIPB4-213	ENST00000541329	MARF1	Q9Y4F3	1742 aa	Known RBP	10.02	□□□□□ -0.8
NPIPB4-213	ENST00000541329	U2SURP	O15042	1029 aa	Known RBP	10.02	□□□□□ -0.81
NPIPB4-213	ENST00000541329	SOX12	O15370	315 aa		10.02	□□□□□ -0.81
NPIPB4-213	ENST00000541329	IFFO2	Q5TF58	517 aa		10.02	□□□□□ -0.81
NPIPB4-213	ENST00000541329	SMG6	Q86US8	1419 aa	Known RBP	10.01	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PAK3	O75914	559 aa	Predicted RBP	10.01	□□□□□ -0.81
NPIPB4-213	ENST00000541329	ESCO1	Q5FWF5	840 aa		10.01	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PHF8	Q9UPP1	1060 aa		10.01	□□□□□ -0.81
NPIPB4-213	ENST00000541329	EMILIN1	Q9Y6C2	1016 aa		10.01	□□□□□ -0.81
NPIPB4-213	ENST00000541329	APAF1	O14727	1248 aa		10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	U2AF1L5	P0DN76	240 aa	Predicted RBP	10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	U2AF1	Q01081	240 aa	Known RBP eCLIP	10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	RRS1	Q15050	365 aa	Known RBP	10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	NUTM2G	Q5VZR2	741 aa		10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	POLK	Q9UBT6	870 aa		10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	NUDC	Q9Y266	331 aa		10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	TTC21A	Q8NDW8	1320 aa		10	□□□□□ -0.81
NPIPB4-213	ENST00000541329	KIF1A	Q12756	1690 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	OVOS2	A0A0J9YW53	1432 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	OVOS2	Q6IE36	1432 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	SSH2	Q76I76	1423 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PEAK1	Q9H792	1746 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	DIAPH1	O60610	1272 aa	Known RBP	9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	CDCA7L	Q96GN5	454 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	ORAI2	Q96SN7	254 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	USP54	Q70EL1	1684 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	TMEM94	Q12767	1356 aa		9.99	□□□□□ -0.81
NPIPB4-213	ENST00000541329	IRX6	P78412	446 aa	Predicted RBP	9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PSME1	Q06323	249 aa		9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	RUNDC1	Q96C34	613 aa		9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	RRP7A	Q9Y3A4	280 aa	Known RBP	9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	LTN1	O94822	1766 aa		9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.98	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PLEKHG5	O94827	1062 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	ATF3	P18847	181 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	NLRP6	P59044	892 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	XPC	Q01831	940 aa	Predicted RBP	9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	NEUROD2	Q15784	382 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	C19orf44	Q9H6X5	657 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	AATK	Q6ZMQ8	1374 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	C1orf167	Q5SNV9	1468 aa		9.97	□□□□□ -0.81
NPIPB4-213	ENST00000541329	TRPM3	Q9HCF6	1732 aa	Predicted RBP	9.96	□□□□□ -0.81
NPIPB4-213	ENST00000541329	PDE3B	Q13370	1112 aa		9.96	□□□□□ -0.82
NPIPB4-213	ENST00000541329	MAPK8IP2	Q13387	824 aa	Predicted RBP	9.96	□□□□□ -0.82
NPIPB4-213	ENST00000541329	ABTB2	Q8N961	1025 aa		9.96	□□□□□ -0.82
NPIPB4-213	ENST00000541329	PNPLA6	Q8IY17	1366 aa		9.96	□□□□□ -0.82
NPIPB4-213	ENST00000541329	LRRC7	Q96NW7	1537 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms