RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 CERS3Q8IU89 383 aa12.15□□□□□ -0.46
CLDN2-202ENST00000540876 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
CLDN2-202ENST00000540876 BRD2P25440 801 aaKnown RBP12.14□□□□□ -0.47
CLDN2-202ENST00000540876 ZNF771Q7L3S4 317 aaPredicted RBP12.14□□□□□ -0.47
CLDN2-202ENST00000540876 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
CLDN2-202ENST00000540876 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
CLDN2-202ENST00000540876 ARHGAP31Q2M1Z3 1444 aa12.14□□□□□ -0.47
CLDN2-202ENST00000540876 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
CLDN2-202ENST00000540876 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
CLDN2-202ENST00000540876 SYNMO15061 1565 aa12.13□□□□□ -0.47
CLDN2-202ENST00000540876 TNRQ92752 1358 aa12.13□□□□□ -0.47
CLDN2-202ENST00000540876 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
CLDN2-202ENST00000540876 IGHDP01880 384 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 KCNJ4P48050 445 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
CLDN2-202ENST00000540876 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
CLDN2-202ENST00000540876 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 TRPM2O94759 1503 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
CLDN2-202ENST00000540876 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
CLDN2-202ENST00000540876 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
CLDN2-202ENST00000540876 FER1L4A9Z1Z3 1794 aa12.12□□□□□ -0.47
CLDN2-202ENST00000540876 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
CLDN2-202ENST00000540876 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
CLDN2-202ENST00000540876 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
CLDN2-202ENST00000540876 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CLDN2-202ENST00000540876 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
CLDN2-202ENST00000540876 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
CLDN2-202ENST00000540876 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 ZKSCAN5Q9Y2L8 839 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 RALBP1Q15311 655 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 PTPRMP28827 1452 aa12.1□□□□□ -0.47
CLDN2-202ENST00000540876 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
CLDN2-202ENST00000540876 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
CLDN2-202ENST00000540876 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
CLDN2-202ENST00000540876 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
CLDN2-202ENST00000540876 ROCK2O75116 1388 aaKnown RBP12.09□□□□□ -0.47
CLDN2-202ENST00000540876 C3P01024 1663 aa12.08□□□□□ -0.47
CLDN2-202ENST00000540876 ADAMTSL3P82987 1691 aa12.08□□□□□ -0.48
CLDN2-202ENST00000540876 HSPA2P54652 639 aa12.08□□□□□ -0.48
CLDN2-202ENST00000540876 MYRIPQ8NFW9 859 aa12.08□□□□□ -0.48
CLDN2-202ENST00000540876 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
CLDN2-202ENST00000540876 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
CLDN2-202ENST00000540876 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
CLDN2-202ENST00000540876 LTKP29376 864 aa12.06□□□□□ -0.48
CLDN2-202ENST00000540876 TMEM132EQ6IEE7 984 aa12.06□□□□□ -0.48
CLDN2-202ENST00000540876 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
CLDN2-202ENST00000540876 SPATA31D1Q6ZQQ2 1576 aa12.06□□□□□ -0.48
CLDN2-202ENST00000540876 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
CLDN2-202ENST00000540876 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
CLDN2-202ENST00000540876 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
CLDN2-202ENST00000540876 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
CLDN2-202ENST00000540876 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
CLDN2-202ENST00000540876 C22orf23Q9BZE7 217 aa12.05□□□□□ -0.48
CLDN2-202ENST00000540876 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
CLDN2-202ENST00000540876 PDCL2Q8N4E4 241 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 A2ML1A8K2U0 1454 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 PTMSP20962 102 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 MCM5P33992 734 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
CLDN2-202ENST00000540876 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
CLDN2-202ENST00000540876 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLDN2-202ENST00000540876 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.48
CLDN2-202ENST00000540876 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.48
CLDN2-202ENST00000540876 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.48
CLDN2-202ENST00000540876 RBSNQ9H1K0 784 aa12.02□□□□□ -0.48
CLDN2-202ENST00000540876 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.48
CLDN2-202ENST00000540876 PTMAP06454 111 aaKnown RBP12.02□□□□□ -0.49
CLDN2-202ENST00000540876 STK26Q9P289 416 aa12.02□□□□□ -0.49
CLDN2-202ENST00000540876 ADGRB3O60242 1522 aa12.02□□□□□ -0.49
CLDN2-202ENST00000540876 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
CLDN2-202ENST00000540876 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 MYO5BQ9ULV0 1848 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
CLDN2-202ENST00000540876 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 PRAG1Q86YV5 1406 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 THEMISQ8N1K5 641 aaPredicted RBP12□□□□□ -0.49
CLDN2-202ENST00000540876 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 RIMS2Q9UQ26 1411 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
CLDN2-202ENST00000540876 HMGN5P82970 282 aaKnown RBP12□□□□□ -0.49
CLDN2-202ENST00000540876 RAB3GAP1Q15042 981 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
CLDN2-202ENST00000540876 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
CLDN2-202ENST00000540876 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 KIF1BO60333 1816 aa12□□□□□ -0.49
CLDN2-202ENST00000540876 BCAR3O75815 825 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms