RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
UBE3B-209ENST00000539584 GGT6Q6P531 493 aa16.75■□□□□ 0.27
UBE3B-209ENST00000539584 CHMP5Q9NZZ3 219 aa16.75■□□□□ 0.27
UBE3B-209ENST00000539584 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
UBE3B-209ENST00000539584 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-209ENST00000539584 TRIM27P14373 513 aa16.75■□□□□ 0.27
UBE3B-209ENST00000539584 ANO8Q9HCE9 1232 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-209ENST00000539584 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
UBE3B-209ENST00000539584 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
UBE3B-209ENST00000539584 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
UBE3B-209ENST00000539584 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
UBE3B-209ENST00000539584 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
UBE3B-209ENST00000539584 POGKQ9P215 609 aa16.73■□□□□ 0.27
UBE3B-209ENST00000539584 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
UBE3B-209ENST00000539584 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
UBE3B-209ENST00000539584 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
UBE3B-209ENST00000539584 ISY1Q9ULR0 285 aaKnown RBP16.72■□□□□ 0.27
UBE3B-209ENST00000539584 NEO1Q92859 1461 aa16.72■□□□□ 0.27
UBE3B-209ENST00000539584 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
UBE3B-209ENST00000539584 ZBTB40Q9NUA8 1239 aa16.72■□□□□ 0.27
UBE3B-209ENST00000539584 MCM4P33991 863 aa16.71■□□□□ 0.27
UBE3B-209ENST00000539584 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
UBE3B-209ENST00000539584 CLTCQ00610 1675 aaKnown RBP16.71■□□□□ 0.27
UBE3B-209ENST00000539584 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
UBE3B-209ENST00000539584 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
UBE3B-209ENST00000539584 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
UBE3B-209ENST00000539584 FCHSD2O94868 740 aa16.7■□□□□ 0.26
UBE3B-209ENST00000539584 RBM25P49756 843 aaKnown RBP16.7■□□□□ 0.26
UBE3B-209ENST00000539584 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
UBE3B-209ENST00000539584 SNX21Q969T3 373 aa16.7■□□□□ 0.26
UBE3B-209ENST00000539584 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
UBE3B-209ENST00000539584 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
UBE3B-209ENST00000539584 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
UBE3B-209ENST00000539584 DDX11L8A8MPP1 907 aa16.69■□□□□ 0.26
UBE3B-209ENST00000539584 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
UBE3B-209ENST00000539584 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
UBE3B-209ENST00000539584 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
UBE3B-209ENST00000539584 FSD2A1L4K1 749 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 FYB1O15117 783 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 PTMSP20962 102 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 RIPK4P57078 832 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 NUCB1Q02818 461 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-209ENST00000539584 ARHGAP45Q92619 1136 aa16.68■□□□□ 0.26
UBE3B-209ENST00000539584 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
UBE3B-209ENST00000539584 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
UBE3B-209ENST00000539584 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-209ENST00000539584 PTPRMP28827 1452 aa16.67■□□□□ 0.26
UBE3B-209ENST00000539584 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
UBE3B-209ENST00000539584 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
UBE3B-209ENST00000539584 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
UBE3B-209ENST00000539584 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
UBE3B-209ENST00000539584 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
UBE3B-209ENST00000539584 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
UBE3B-209ENST00000539584 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
UBE3B-209ENST00000539584 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
UBE3B-209ENST00000539584 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
UBE3B-209ENST00000539584 IDI1Q13907 227 aa16.64■□□□□ 0.25
UBE3B-209ENST00000539584 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
UBE3B-209ENST00000539584 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
UBE3B-209ENST00000539584 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
UBE3B-209ENST00000539584 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
UBE3B-209ENST00000539584 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
UBE3B-209ENST00000539584 MRE11P49959 708 aa16.62■□□□□ 0.25
UBE3B-209ENST00000539584 TRAK2O60296 914 aa16.62■□□□□ 0.25
UBE3B-209ENST00000539584 DDIT3P35638 169 aa16.62■□□□□ 0.25
UBE3B-209ENST00000539584 FAM135BQ49AJ0 1406 aa16.61■□□□□ 0.25
UBE3B-209ENST00000539584 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
UBE3B-209ENST00000539584 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
UBE3B-209ENST00000539584 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
UBE3B-209ENST00000539584 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
UBE3B-209ENST00000539584 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
UBE3B-209ENST00000539584 ATP7BP35670 1465 aa16.59■□□□□ 0.25
UBE3B-209ENST00000539584 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBE3B-209ENST00000539584 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
UBE3B-209ENST00000539584 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
UBE3B-209ENST00000539584 GBP4Q96PP9 640 aa16.58■□□□□ 0.25
UBE3B-209ENST00000539584 DLC1Q96QB1 1528 aa16.58■□□□□ 0.25
UBE3B-209ENST00000539584 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
UBE3B-209ENST00000539584 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-209ENST00000539584 GNAI1P63096 354 aa16.58■□□□□ 0.24
UBE3B-209ENST00000539584 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
UBE3B-209ENST00000539584 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
UBE3B-209ENST00000539584 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
UBE3B-209ENST00000539584 STK26Q9P289 416 aa16.57■□□□□ 0.24
UBE3B-209ENST00000539584 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
UBE3B-209ENST00000539584 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
UBE3B-209ENST00000539584 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-209ENST00000539584 CDK19Q9BWU1 502 aa16.56■□□□□ 0.24
UBE3B-209ENST00000539584 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
UBE3B-209ENST00000539584 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-209ENST00000539584 VAMP4O75379 141 aa16.55■□□□□ 0.24
UBE3B-209ENST00000539584 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-209ENST00000539584 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
UBE3B-209ENST00000539584 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
UBE3B-209ENST00000539584 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
UBE3B-209ENST00000539584 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
UBE3B-209ENST00000539584 AATKQ6ZMQ8 1374 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 ABCC4O15439 1325 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms