RNA–Protein interactions for RNA: ENST00000538501.5

PPME1-204, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 744 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-204ENST00000538501 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
PPME1-204ENST00000538501 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
PPME1-204ENST00000538501 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
PPME1-204ENST00000538501 APLP1P51693 650 aa11.19□□□□□ -0.62
PPME1-204ENST00000538501 BANK1Q8NDB2 785 aa11.19□□□□□ -0.62
PPME1-204ENST00000538501 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
PPME1-204ENST00000538501 SOCS7O14512 581 aa11.18□□□□□ -0.62
PPME1-204ENST00000538501 MTMR2Q13614 643 aa11.18□□□□□ -0.62
PPME1-204ENST00000538501 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
PPME1-204ENST00000538501 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
PPME1-204ENST00000538501 NR1I2O75469 434 aa11.17□□□□□ -0.62
PPME1-204ENST00000538501 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
PPME1-204ENST00000538501 RFC5P40937 340 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 PCDHGC3Q9UN70 934 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 PCDHB15Q9Y5E8 787 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 RIMBP3CA6NJZ7 1639 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 RIMBP3BA6NNM3 1639 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 RIMBP3Q9UFD9 1639 aa11.16□□□□□ -0.62
PPME1-204ENST00000538501 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
PPME1-204ENST00000538501 HRCP23327 699 aa11.15□□□□□ -0.62
PPME1-204ENST00000538501 PLB1Q6P1J6 1458 aa11.14□□□□□ -0.63
PPME1-204ENST00000538501 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
PPME1-204ENST00000538501 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
PPME1-204ENST00000538501 QPCTQ16769 361 aa11.14□□□□□ -0.63
PPME1-204ENST00000538501 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
PPME1-204ENST00000538501 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
PPME1-204ENST00000538501 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
PPME1-204ENST00000538501 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
PPME1-204ENST00000538501 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
PPME1-204ENST00000538501 GUCA2AQ02747 115 aa11.12□□□□□ -0.63
PPME1-204ENST00000538501 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
PPME1-204ENST00000538501 RETREG3Q86VR2 466 aa11.12□□□□□ -0.63
PPME1-204ENST00000538501 HLA-CQ95604 372 aa11.12□□□□□ -0.63
PPME1-204ENST00000538501 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 APBB1O00213 710 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 DESI1Q6ICB0 168 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
PPME1-204ENST00000538501 UHRF1BP1LA0JNW5 1464 aa11.11□□□□□ -0.63
PPME1-204ENST00000538501 MCM6Q14566 821 aa11.1□□□□□ -0.63
PPME1-204ENST00000538501 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
PPME1-204ENST00000538501 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
PPME1-204ENST00000538501 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
PPME1-204ENST00000538501 FYCO1Q9BQS8 1478 aa11.1□□□□□ -0.63
PPME1-204ENST00000538501 ABCA8O94911 1581 aa11.1□□□□□ -0.63
PPME1-204ENST00000538501 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
PPME1-204ENST00000538501 FMNL1O95466 1100 aaPredicted RBP11.09□□□□□ -0.63
PPME1-204ENST00000538501 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
PPME1-204ENST00000538501 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
PPME1-204ENST00000538501 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
PPME1-204ENST00000538501 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
PPME1-204ENST00000538501 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
PPME1-204ENST00000538501 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
PPME1-204ENST00000538501 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
PPME1-204ENST00000538501 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
PPME1-204ENST00000538501 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
PPME1-204ENST00000538501 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
PPME1-204ENST00000538501 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
PPME1-204ENST00000538501 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
PPME1-204ENST00000538501 ATP10BO94823 1461 aa11.06□□□□□ -0.64
PPME1-204ENST00000538501 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
PPME1-204ENST00000538501 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
PPME1-204ENST00000538501 PTPN5P54829 565 aa11.06□□□□□ -0.64
PPME1-204ENST00000538501 PCF11O94913 1555 aaKnown RBP11.06□□□□□ -0.64
PPME1-204ENST00000538501 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
PPME1-204ENST00000538501 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
PPME1-204ENST00000538501 IL21Q9HBE4 155 aa11.05□□□□□ -0.64
PPME1-204ENST00000538501 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
PPME1-204ENST00000538501 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
PPME1-204ENST00000538501 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
PPME1-204ENST00000538501 MTRQ99707 1265 aa11.04□□□□□ -0.64
PPME1-204ENST00000538501 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
PPME1-204ENST00000538501 ADCY10Q96PN6 1610 aa11.03□□□□□ -0.64
PPME1-204ENST00000538501 ZPR1O75312 459 aa11.03□□□□□ -0.64
PPME1-204ENST00000538501 AP1G2O75843 785 aa11.03□□□□□ -0.64
PPME1-204ENST00000538501 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
PPME1-204ENST00000538501 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
PPME1-204ENST00000538501 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
PPME1-204ENST00000538501 PRM3Q9NNZ6 103 aa11.02□□□□□ -0.65
PPME1-204ENST00000538501 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
PPME1-204ENST00000538501 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
PPME1-204ENST00000538501 COPS2P61201 443 aa11.01□□□□□ -0.65
PPME1-204ENST00000538501 TJAP1Q5JTD0 557 aa11.01□□□□□ -0.65
PPME1-204ENST00000538501 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
PPME1-204ENST00000538501 SPSB2Q99619 263 aa11.01□□□□□ -0.65
PPME1-204ENST00000538501 ADH1BP00325 375 aa11□□□□□ -0.65
PPME1-204ENST00000538501 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
PPME1-204ENST00000538501 ASXL2Q76L83 1435 aa11□□□□□ -0.65
PPME1-204ENST00000538501 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
PPME1-204ENST00000538501 MTMR14Q8NCE2 650 aa10.99□□□□□ -0.65
PPME1-204ENST00000538501 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
PPME1-204ENST00000538501 A6NJR5 290 aa10.98□□□□□ -0.65
PPME1-204ENST00000538501 JUNDP17535 347 aa10.98□□□□□ -0.65
PPME1-204ENST00000538501 ZMYND15Q9H091 742 aa10.98□□□□□ -0.65
PPME1-204ENST00000538501 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
PPME1-204ENST00000538501 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
PPME1-204ENST00000538501 MMP16P51512 607 aa10.97□□□□□ -0.65
PPME1-204ENST00000538501 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
PPME1-204ENST00000538501 PTPRNQ16849 979 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms