RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
LINC00346-201ENST00000538077 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
LINC00346-201ENST00000538077 IGF1RP08069 1367 aa13.5□□□□□ -0.25
LINC00346-201ENST00000538077 CNTLNQ9NXG0 1405 aa13.5□□□□□ -0.25
LINC00346-201ENST00000538077 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
LINC00346-201ENST00000538077 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
LINC00346-201ENST00000538077 STK3Q13188 491 aa13.5□□□□□ -0.25
LINC00346-201ENST00000538077 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
LINC00346-201ENST00000538077 NOB1Q9ULX3 412 aaKnown RBP13.49□□□□□ -0.25
LINC00346-201ENST00000538077 SKIDA1Q1XH10 827 aa13.49□□□□□ -0.25
LINC00346-201ENST00000538077 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
LINC00346-201ENST00000538077 EXOSC9Q06265 439 aaKnown RBP13.48□□□□□ -0.25
LINC00346-201ENST00000538077 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
LINC00346-201ENST00000538077 GAS2L2Q8NHY3 880 aa13.48□□□□□ -0.25
LINC00346-201ENST00000538077 RAPGEF3O95398 923 aa13.48□□□□□ -0.25
LINC00346-201ENST00000538077 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
LINC00346-201ENST00000538077 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
LINC00346-201ENST00000538077 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
LINC00346-201ENST00000538077 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 PIBF1Q8WXW3 757 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
LINC00346-201ENST00000538077 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
LINC00346-201ENST00000538077 KIF21BO75037 1637 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 CDC45O75419 566 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 TCP11L2Q8N4U5 519 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.25
LINC00346-201ENST00000538077 XBP1P17861 261 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
LINC00346-201ENST00000538077 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.26
LINC00346-201ENST00000538077 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.26
LINC00346-201ENST00000538077 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.26
LINC00346-201ENST00000538077 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
LINC00346-201ENST00000538077 KRT18P05783 430 aaKnown RBP13.45□□□□□ -0.26
LINC00346-201ENST00000538077 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
LINC00346-201ENST00000538077 CFTRP13569 1480 aa13.45□□□□□ -0.26
LINC00346-201ENST00000538077 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
LINC00346-201ENST00000538077 SLC3A2P08195 630 aaKnown RBP13.45□□□□□ -0.26
LINC00346-201ENST00000538077 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
LINC00346-201ENST00000538077 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00346-201ENST00000538077 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
LINC00346-201ENST00000538077 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 SPG7Q9UQ90 795 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 PSMA5P28066 241 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 THEMISQ8N1K5 641 aaPredicted RBP13.44□□□□□ -0.26
LINC00346-201ENST00000538077 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
LINC00346-201ENST00000538077 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 GSE1Q14687 1217 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
LINC00346-201ENST00000538077 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
LINC00346-201ENST00000538077 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
LINC00346-201ENST00000538077 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
LINC00346-201ENST00000538077 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
LINC00346-201ENST00000538077 PRDM11Q9NQV5 511 aa13.42□□□□□ -0.26
LINC00346-201ENST00000538077 OFD1O75665 1012 aa13.42□□□□□ -0.26
LINC00346-201ENST00000538077 SETQ01105 290 aaPredicted RBP13.42□□□□□ -0.26
LINC00346-201ENST00000538077 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
LINC00346-201ENST00000538077 GNAI2P04899 355 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 CHMP4BP1P59074 171 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 RNF214Q8ND24 703 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 CAGE1Q8TC20 777 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 BCAR3O75815 825 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
LINC00346-201ENST00000538077 SMC2O95347 1197 aa13.41□□□□□ -0.26
LINC00346-201ENST00000538077 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 ERBINQ96RT1 1412 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 SDF4Q9BRK5 362 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
LINC00346-201ENST00000538077 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 GNAI3P08754 354 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 CCDC57Q2TAC2 916 aa13.4□□□□□ -0.26
LINC00346-201ENST00000538077 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
LINC00346-201ENST00000538077 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00346-201ENST00000538077 GPS2Q13227 327 aa13.39□□□□□ -0.27
LINC00346-201ENST00000538077 RUFY1Q96T51 708 aa13.38□□□□□ -0.27
LINC00346-201ENST00000538077 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
LINC00346-201ENST00000538077 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00346-201ENST00000538077 SNAPC4Q5SXM2 1469 aa13.38□□□□□ -0.27
LINC00346-201ENST00000538077 AACSQ86V21 672 aa13.38□□□□□ -0.27
LINC00346-201ENST00000538077 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
LINC00346-201ENST00000538077 NEK4P51957 841 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms