RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
VPS37C-204ENST00000538036 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
VPS37C-204ENST00000538036 DISP2A7MBM2 1401 aa15.07■□□□□ 0
VPS37C-204ENST00000538036 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
VPS37C-204ENST00000538036 PRR36Q9H6K5 1346 aa15.06■□□□□ 0
VPS37C-204ENST00000538036 ADGRB1O14514 1584 aa15.06■□□□□ 0
VPS37C-204ENST00000538036 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
VPS37C-204ENST00000538036 FAM196AQ6ZSG2 479 aa15.05■□□□□ -0
VPS37C-204ENST00000538036 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
VPS37C-204ENST00000538036 NRAPQ86VF7 1730 aa15.05■□□□□ -0
VPS37C-204ENST00000538036 TRPM3Q9HCF6 1732 aaPredicted RBP15.05■□□□□ -0
VPS37C-204ENST00000538036 SPATA31A1Q5TZJ5 1347 aa15.04■□□□□ -0
VPS37C-204ENST00000538036 ALS2Q96Q42 1657 aa15.03■□□□□ -0
VPS37C-204ENST00000538036 R3HDM1Q15032 1099 aaKnown RBP15.03■□□□□ -0
VPS37C-204ENST00000538036 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
VPS37C-204ENST00000538036 FAM182BQ5T319 152 aa15.02■□□□□ -0
VPS37C-204ENST00000538036 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
VPS37C-204ENST00000538036 RGPD1P0DJD0 1748 aa15.01□□□□□ -0.01
VPS37C-204ENST00000538036 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
VPS37C-204ENST00000538036 CAMKK2Q96RR4 588 aa15.01□□□□□ -0.01
VPS37C-204ENST00000538036 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
VPS37C-204ENST00000538036 KIAA0232Q92628 1395 aa15□□□□□ -0.01
VPS37C-204ENST00000538036 THSD7AQ9UPZ6 1657 aa15□□□□□ -0.01
VPS37C-204ENST00000538036 EZH2Q15910 746 aaKnown RBP15□□□□□ -0.01
VPS37C-204ENST00000538036 BARGINQ6ZT62 677 aa15□□□□□ -0.01
VPS37C-204ENST00000538036 TRIM37O94972 964 aa14.99□□□□□ -0.01
VPS37C-204ENST00000538036 ATP7BP35670 1465 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 APBA3O96018 575 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 EVA1CP58658 441 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 PDE3BQ13370 1112 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
VPS37C-204ENST00000538036 C11orf95C9JLR9 678 aaPredicted RBP14.97□□□□□ -0.01
VPS37C-204ENST00000538036 ZC3H6P61129 1189 aaKnown RBP14.97□□□□□ -0.01
VPS37C-204ENST00000538036 CHRNA2Q15822 529 aa14.97□□□□□ -0.01
VPS37C-204ENST00000538036 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
VPS37C-204ENST00000538036 PLEKHG3A1L390 1219 aa14.96□□□□□ -0.01
VPS37C-204ENST00000538036 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
VPS37C-204ENST00000538036 NBPF14Q5TI25 921 aa14.96□□□□□ -0.01
VPS37C-204ENST00000538036 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
VPS37C-204ENST00000538036 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.02
VPS37C-204ENST00000538036 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
VPS37C-204ENST00000538036 TCP11L2Q8N4U5 519 aa14.95□□□□□ -0.02
VPS37C-204ENST00000538036 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
VPS37C-204ENST00000538036 USP35Q9P2H5 1018 aa14.94□□□□□ -0.02
VPS37C-204ENST00000538036 CPDO75976 1380 aa14.94□□□□□ -0.02
VPS37C-204ENST00000538036 ACEP12821 1306 aa14.93□□□□□ -0.02
VPS37C-204ENST00000538036 SSH2Q76I76 1423 aa14.93□□□□□ -0.02
VPS37C-204ENST00000538036 TNS1Q9HBL0 1735 aaKnown RBP14.93□□□□□ -0.02
VPS37C-204ENST00000538036 NUTM2GQ5VZR2 741 aa14.93□□□□□ -0.02
VPS37C-204ENST00000538036 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
VPS37C-204ENST00000538036 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
VPS37C-204ENST00000538036 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
VPS37C-204ENST00000538036 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
VPS37C-204ENST00000538036 USP19O94966 1318 aa14.91□□□□□ -0.02
VPS37C-204ENST00000538036 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
VPS37C-204ENST00000538036 GCP02774 474 aa14.89□□□□□ -0.03
VPS37C-204ENST00000538036 CAMTA1Q9Y6Y1 1673 aa14.89□□□□□ -0.03
VPS37C-204ENST00000538036 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
VPS37C-204ENST00000538036 SPON1Q9HCB6 807 aa14.88□□□□□ -0.03
VPS37C-204ENST00000538036 ARHGEF28Q8N1W1 1705 aaKnown RBP14.87□□□□□ -0.03
VPS37C-204ENST00000538036 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
VPS37C-204ENST00000538036 KCNQ2O43526 872 aa14.86□□□□□ -0.03
VPS37C-204ENST00000538036 YY1P25490 414 aa14.86□□□□□ -0.03
VPS37C-204ENST00000538036 PLSCR1O15162 318 aa14.85□□□□□ -0.03
VPS37C-204ENST00000538036 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
VPS37C-204ENST00000538036 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
VPS37C-204ENST00000538036 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
VPS37C-204ENST00000538036 CRB1P82279 1406 aa14.84□□□□□ -0.03
VPS37C-204ENST00000538036 AATKQ6ZMQ8 1374 aa14.84□□□□□ -0.03
VPS37C-204ENST00000538036 TOPAZ1Q8N9V7 1692 aa14.84□□□□□ -0.03
VPS37C-204ENST00000538036 LMO7Q8WWI1 1683 aa14.84□□□□□ -0.03
VPS37C-204ENST00000538036 RREB1Q92766 1687 aa14.84□□□□□ -0.03
VPS37C-204ENST00000538036 COL5A2P05997 1499 aaPredicted RBP14.83□□□□□ -0.03
VPS37C-204ENST00000538036 NINLQ9Y2I6 1382 aa14.83□□□□□ -0.04
VPS37C-204ENST00000538036 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
VPS37C-204ENST00000538036 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
VPS37C-204ENST00000538036 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
VPS37C-204ENST00000538036 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.04
VPS37C-204ENST00000538036 NLRP6P59044 892 aa14.82□□□□□ -0.04
VPS37C-204ENST00000538036 DDB1Q16531 1140 aa14.82□□□□□ -0.04
VPS37C-204ENST00000538036 CDCA7Q9BWT1 371 aaPredicted RBP14.82□□□□□ -0.04
VPS37C-204ENST00000538036 CENPJQ9HC77 1338 aaPredicted RBP14.82□□□□□ -0.04
VPS37C-204ENST00000538036 KIAA1210Q9ULL0 1709 aa14.81□□□□□ -0.04
VPS37C-204ENST00000538036 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
VPS37C-204ENST00000538036 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
VPS37C-204ENST00000538036 NUP188Q5SRE5 1749 aa14.8□□□□□ -0.04
VPS37C-204ENST00000538036 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
VPS37C-204ENST00000538036 CABP1Q9NZU7 370 aa14.8□□□□□ -0.04
VPS37C-204ENST00000538036 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
VPS37C-204ENST00000538036 BCL9O00512 1426 aa14.79□□□□□ -0.04
VPS37C-204ENST00000538036 TOM1L2Q6ZVM7 507 aa14.79□□□□□ -0.04
VPS37C-204ENST00000538036 USP6P35125 1406 aa14.78□□□□□ -0.04
VPS37C-204ENST00000538036 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
VPS37C-204ENST00000538036 ZBTB7CA1YPR0 619 aa14.77□□□□□ -0.05
VPS37C-204ENST00000538036 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.05
VPS37C-204ENST00000538036 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
VPS37C-204ENST00000538036 SLIT3O75094 1523 aa14.76□□□□□ -0.05
VPS37C-204ENST00000538036 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
VPS37C-204ENST00000538036 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms