RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 PLEKHH1Q9ULM0 1364 aa16.16■□□□□ 0.18
TSPAN9-206ENST00000537971 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
TSPAN9-206ENST00000537971 SLC12A5Q9H2X9 1139 aa16.16■□□□□ 0.18
TSPAN9-206ENST00000537971 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
TSPAN9-206ENST00000537971 CHRNA2Q15822 529 aa16.15■□□□□ 0.18
TSPAN9-206ENST00000537971 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-206ENST00000537971 ALKQ9UM73 1620 aa16.15■□□□□ 0.18
TSPAN9-206ENST00000537971 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
TSPAN9-206ENST00000537971 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.18
TSPAN9-206ENST00000537971 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
TSPAN9-206ENST00000537971 TMEM131LA2VDJ0 1609 aa16.14■□□□□ 0.17
TSPAN9-206ENST00000537971 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
TSPAN9-206ENST00000537971 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
TSPAN9-206ENST00000537971 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
TSPAN9-206ENST00000537971 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
TSPAN9-206ENST00000537971 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
TSPAN9-206ENST00000537971 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
TSPAN9-206ENST00000537971 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
TSPAN9-206ENST00000537971 UNC5CLQ8IV45 518 aa16.1■□□□□ 0.17
TSPAN9-206ENST00000537971 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
TSPAN9-206ENST00000537971 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 EXOC5O00471 708 aa16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 GCP02774 474 aa16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
TSPAN9-206ENST00000537971 NINLQ9Y2I6 1382 aa16.08■□□□□ 0.16
TSPAN9-206ENST00000537971 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
TSPAN9-206ENST00000537971 BAG6P46379 1132 aa16.08■□□□□ 0.16
TSPAN9-206ENST00000537971 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
TSPAN9-206ENST00000537971 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
TSPAN9-206ENST00000537971 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 MSH5O43196 834 aa16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 CDCA7Q9BWT1 371 aaPredicted RBP16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 PANK3Q9H999 370 aa16.06■□□□□ 0.16
TSPAN9-206ENST00000537971 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 NEURL4Q96JN8 1562 aa16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
TSPAN9-206ENST00000537971 DDB1Q16531 1140 aa16.04■□□□□ 0.16
TSPAN9-206ENST00000537971 NBPF14Q5TI25 921 aa16.04■□□□□ 0.16
TSPAN9-206ENST00000537971 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 MST1RQ04912 1400 aa16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 NME9Q86XW9 330 aa16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 ARXQ96QS3 562 aa16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
TSPAN9-206ENST00000537971 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
TSPAN9-206ENST00000537971 TCP11L2Q8N4U5 519 aa16.01■□□□□ 0.15
TSPAN9-206ENST00000537971 TNS3Q68CZ2 1445 aa16.01■□□□□ 0.15
TSPAN9-206ENST00000537971 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
TSPAN9-206ENST00000537971 LTBP4Q8N2S1 1624 aa16■□□□□ 0.15
TSPAN9-206ENST00000537971 NPHP1O15259 732 aa16■□□□□ 0.15
TSPAN9-206ENST00000537971 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
TSPAN9-206ENST00000537971 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
TSPAN9-206ENST00000537971 NBR1Q14596 966 aa15.99■□□□□ 0.15
TSPAN9-206ENST00000537971 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
TSPAN9-206ENST00000537971 SEPT12Q8IYM1 358 aa15.99■□□□□ 0.15
TSPAN9-206ENST00000537971 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
TSPAN9-206ENST00000537971 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
TSPAN9-206ENST00000537971 PNPLA6Q8IY17 1366 aa15.98■□□□□ 0.15
TSPAN9-206ENST00000537971 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
TSPAN9-206ENST00000537971 TECPR2O15040 1411 aa15.98■□□□□ 0.15
TSPAN9-206ENST00000537971 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
TSPAN9-206ENST00000537971 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
TSPAN9-206ENST00000537971 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
TSPAN9-206ENST00000537971 LAMC1P11047 1609 aa15.96■□□□□ 0.15
TSPAN9-206ENST00000537971 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
TSPAN9-206ENST00000537971 PRR36Q9H6K5 1346 aa15.96■□□□□ 0.14
TSPAN9-206ENST00000537971 RALGAPBQ86X10 1494 aa15.96■□□□□ 0.14
TSPAN9-206ENST00000537971 FAM196AQ6ZSG2 479 aa15.95■□□□□ 0.14
TSPAN9-206ENST00000537971 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
TSPAN9-206ENST00000537971 KIAA0232Q92628 1395 aa15.94■□□□□ 0.14
TSPAN9-206ENST00000537971 RRS1Q15050 365 aaKnown RBP15.93■□□□□ 0.14
TSPAN9-206ENST00000537971 VPS72Q15906 364 aa15.93■□□□□ 0.14
TSPAN9-206ENST00000537971 KLHL34Q8N239 644 aa15.93■□□□□ 0.14
TSPAN9-206ENST00000537971 DLC1Q96QB1 1528 aa15.93■□□□□ 0.14
TSPAN9-206ENST00000537971 IL2RBP14784 551 aa15.92■□□□□ 0.14
TSPAN9-206ENST00000537971 ASXL1Q8IXJ9 1541 aa15.92■□□□□ 0.14
TSPAN9-206ENST00000537971 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
TSPAN9-206ENST00000537971 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
TSPAN9-206ENST00000537971 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
TSPAN9-206ENST00000537971 FAM83GA6ND36 823 aa15.91■□□□□ 0.14
TSPAN9-206ENST00000537971 APBA3O96018 575 aa15.91■□□□□ 0.14
TSPAN9-206ENST00000537971 SOCS7O14512 581 aa15.91■□□□□ 0.14
TSPAN9-206ENST00000537971 TULP4Q9NRJ4 1543 aa15.9■□□□□ 0.14
TSPAN9-206ENST00000537971 DIAPH1O60610 1272 aaKnown RBP15.9■□□□□ 0.14
TSPAN9-206ENST00000537971 CCDC125Q86Z20 511 aa15.9■□□□□ 0.14
TSPAN9-206ENST00000537971 ANKRD36BQ8N2N9 1353 aa15.89■□□□□ 0.13
TSPAN9-206ENST00000537971 THRAP3Q9Y2W1 955 aaKnown RBP15.89■□□□□ 0.13
TSPAN9-206ENST00000537971 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
TSPAN9-206ENST00000537971 TEFQ10587 303 aa15.88■□□□□ 0.13
TSPAN9-206ENST00000537971 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
TSPAN9-206ENST00000537971 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms