RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
LMO3-216ENST00000537568 NPATQ14207 1427 aa13.13□□□□□ -0.31
LMO3-216ENST00000537568 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
LMO3-216ENST00000537568 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
LMO3-216ENST00000537568 A0A0G2JS52 829 aa13.12□□□□□ -0.31
LMO3-216ENST00000537568 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
LMO3-216ENST00000537568 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
LMO3-216ENST00000537568 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
LMO3-216ENST00000537568 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
LMO3-216ENST00000537568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMO3-216ENST00000537568 VWDEQ8N2E2 1590 aa13.1□□□□□ -0.31
LMO3-216ENST00000537568 KCNC4Q03721 635 aa13.09□□□□□ -0.31
LMO3-216ENST00000537568 ZNF142P52746 1687 aaPredicted RBP13.08□□□□□ -0.31
LMO3-216ENST00000537568 AGLP35573 1532 aa13.08□□□□□ -0.31
LMO3-216ENST00000537568 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
LMO3-216ENST00000537568 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
LMO3-216ENST00000537568 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
LMO3-216ENST00000537568 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
LMO3-216ENST00000537568 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
LMO3-216ENST00000537568 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
LMO3-216ENST00000537568 DNAJB2P25686 324 aa13.06□□□□□ -0.32
LMO3-216ENST00000537568 HIC1Q14526 733 aa13.06□□□□□ -0.32
LMO3-216ENST00000537568 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
LMO3-216ENST00000537568 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
LMO3-216ENST00000537568 APLP1P51693 650 aa13.05□□□□□ -0.32
LMO3-216ENST00000537568 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
LMO3-216ENST00000537568 GPR37O15354 613 aa13.04□□□□□ -0.32
LMO3-216ENST00000537568 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
LMO3-216ENST00000537568 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
LMO3-216ENST00000537568 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
LMO3-216ENST00000537568 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
LMO3-216ENST00000537568 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
LMO3-216ENST00000537568 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
LMO3-216ENST00000537568 FECHP22830 423 aa13.02□□□□□ -0.33
LMO3-216ENST00000537568 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
LMO3-216ENST00000537568 MTRQ99707 1265 aa13.02□□□□□ -0.33
LMO3-216ENST00000537568 KDM5CP41229 1560 aa13.02□□□□□ -0.33
LMO3-216ENST00000537568 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.33
LMO3-216ENST00000537568 GNPATO15228 680 aa13.01□□□□□ -0.33
LMO3-216ENST00000537568 ZMYND10O75800 440 aa13.01□□□□□ -0.33
LMO3-216ENST00000537568 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
LMO3-216ENST00000537568 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
LMO3-216ENST00000537568 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
LMO3-216ENST00000537568 ABCA6Q8N139 1617 aa13□□□□□ -0.33
LMO3-216ENST00000537568 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
LMO3-216ENST00000537568 PLCH2O75038 1416 aa12.99□□□□□ -0.33
LMO3-216ENST00000537568 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
LMO3-216ENST00000537568 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
LMO3-216ENST00000537568 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
LMO3-216ENST00000537568 RAPGEF6Q8TEU7 1601 aa12.99□□□□□ -0.33
LMO3-216ENST00000537568 RGS20O76081 388 aa12.98□□□□□ -0.33
LMO3-216ENST00000537568 IL21Q9HBE4 155 aa12.98□□□□□ -0.33
LMO3-216ENST00000537568 MROH2AA6NES4 1674 aa12.98□□□□□ -0.33
LMO3-216ENST00000537568 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
LMO3-216ENST00000537568 OATP04181 439 aa12.97□□□□□ -0.33
LMO3-216ENST00000537568 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
LMO3-216ENST00000537568 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
LMO3-216ENST00000537568 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
LMO3-216ENST00000537568 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
LMO3-216ENST00000537568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
LMO3-216ENST00000537568 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
LMO3-216ENST00000537568 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
LMO3-216ENST00000537568 PLEKHD1A6NEE1 506 aa12.94□□□□□ -0.34
LMO3-216ENST00000537568 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
LMO3-216ENST00000537568 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
LMO3-216ENST00000537568 COPS2P61201 443 aa12.93□□□□□ -0.34
LMO3-216ENST00000537568 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
LMO3-216ENST00000537568 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
LMO3-216ENST00000537568 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
LMO3-216ENST00000537568 PRR14Q9BWN1 585 aa12.91□□□□□ -0.34
LMO3-216ENST00000537568 LRP6O75581 1613 aa12.91□□□□□ -0.34
LMO3-216ENST00000537568 SLC10A3P09131 477 aa12.9□□□□□ -0.34
LMO3-216ENST00000537568 MED14O60244 1454 aa12.9□□□□□ -0.34
LMO3-216ENST00000537568 CFHP08603 1231 aa12.89□□□□□ -0.35
LMO3-216ENST00000537568 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
LMO3-216ENST00000537568 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
LMO3-216ENST00000537568 SYNMO15061 1565 aa12.89□□□□□ -0.35
LMO3-216ENST00000537568 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
LMO3-216ENST00000537568 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
LMO3-216ENST00000537568 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
LMO3-216ENST00000537568 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
LMO3-216ENST00000537568 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
LMO3-216ENST00000537568 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
LMO3-216ENST00000537568 AK7Q96M32 723 aa12.87□□□□□ -0.35
LMO3-216ENST00000537568 EP400Q96L91 3159 aa12.87□□□□□ -0.35
LMO3-216ENST00000537568 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
LMO3-216ENST00000537568 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
LMO3-216ENST00000537568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.85□□□□□ -0.35
LMO3-216ENST00000537568 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
LMO3-216ENST00000537568 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
LMO3-216ENST00000537568 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
LMO3-216ENST00000537568 CLTCQ00610 1675 aaKnown RBP12.85□□□□□ -0.35
LMO3-216ENST00000537568 ZPR1O75312 459 aa12.84□□□□□ -0.35
LMO3-216ENST00000537568 RXRBP28702 533 aa12.84□□□□□ -0.35
LMO3-216ENST00000537568 ZNF772Q68DY9 489 aaPredicted RBP12.84□□□□□ -0.35
LMO3-216ENST00000537568 SAMD9Q5K651 1589 aa12.84□□□□□ -0.35
LMO3-216ENST00000537568 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.35
LMO3-216ENST00000537568 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
LMO3-216ENST00000537568 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
LMO3-216ENST00000537568 RGS12O14924 1447 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms