RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
CACNB3-202ENST00000536187 TTC21BQ7Z4L5 1316 aa24.45■■□□□ 1.5
CACNB3-202ENST00000536187 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
CACNB3-202ENST00000536187 NPC1L1Q9UHC9 1359 aa24.43■■□□□ 1.5
CACNB3-202ENST00000536187 CCDC184Q52MB2 194 aa24.43■■□□□ 1.5
CACNB3-202ENST00000536187 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
CACNB3-202ENST00000536187 TRPM3Q9HCF6 1732 aaPredicted RBP24.42■■□□□ 1.5
CACNB3-202ENST00000536187 ANKRD26Q9UPS8 1709 aa24.42■■□□□ 1.5
CACNB3-202ENST00000536187 MARF1Q9Y4F3 1742 aaKnown RBP24.4■■□□□ 1.5
CACNB3-202ENST00000536187 TNNT2P45379 298 aaPredicted RBP24.38■■□□□ 1.49
CACNB3-202ENST00000536187 PSME1Q06323 249 aa24.38■■□□□ 1.49
CACNB3-202ENST00000536187 ROBO1Q9Y6N7 1651 aa24.38■■□□□ 1.49
CACNB3-202ENST00000536187 FBLN1P23142 703 aa24.38■■□□□ 1.49
CACNB3-202ENST00000536187 PXDNQ92626 1479 aa24.37■■□□□ 1.49
CACNB3-202ENST00000536187 NUTM2GQ5VZR2 741 aa24.36■■□□□ 1.49
CACNB3-202ENST00000536187 PAK3O75914 559 aaPredicted RBP24.36■■□□□ 1.49
CACNB3-202ENST00000536187 NSD2O96028 1365 aa24.35■■□□□ 1.49
CACNB3-202ENST00000536187 RALBP1Q15311 655 aa24.35■■□□□ 1.49
CACNB3-202ENST00000536187 KRT28Q7Z3Y7 464 aa24.35■■□□□ 1.49
CACNB3-202ENST00000536187 MORC1Q86VD1 984 aa24.34■■□□□ 1.49
CACNB3-202ENST00000536187 OVOS2A0A0J9YW53 1432 aa24.34■■□□□ 1.49
CACNB3-202ENST00000536187 OVOS2Q6IE36 1432 aa24.34■■□□□ 1.49
CACNB3-202ENST00000536187 NHSL1Q5SYE7 1610 aa24.34■■□□□ 1.49
CACNB3-202ENST00000536187 CERKQ8TCT0 537 aa24.33■■□□□ 1.49
CACNB3-202ENST00000536187 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
CACNB3-202ENST00000536187 ALS2Q96Q42 1657 aa24.32■■□□□ 1.48
CACNB3-202ENST00000536187 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
CACNB3-202ENST00000536187 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
CACNB3-202ENST00000536187 NPHP3Q7Z494 1330 aa24.31■■□□□ 1.48
CACNB3-202ENST00000536187 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
CACNB3-202ENST00000536187 PIP4K2BP78356 416 aa24.29■■□□□ 1.48
CACNB3-202ENST00000536187 USP54Q70EL1 1684 aa24.28■■□□□ 1.48
CACNB3-202ENST00000536187 UBAP1LF5GYI3 381 aa24.28■■□□□ 1.48
CACNB3-202ENST00000536187 PLEKHG5O94827 1062 aa24.28■■□□□ 1.48
CACNB3-202ENST00000536187 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
CACNB3-202ENST00000536187 USP31Q70CQ4 1352 aa24.27■■□□□ 1.48
CACNB3-202ENST00000536187 NLRP6P59044 892 aa24.27■■□□□ 1.48
CACNB3-202ENST00000536187 COG3Q96JB2 828 aa24.27■■□□□ 1.48
CACNB3-202ENST00000536187 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
CACNB3-202ENST00000536187 SOX12O15370 315 aa24.26■■□□□ 1.47
CACNB3-202ENST00000536187 LMOD2Q6P5Q4 547 aa24.26■■□□□ 1.47
CACNB3-202ENST00000536187 BRD4O60885 1362 aaPredicted RBP24.25■■□□□ 1.47
CACNB3-202ENST00000536187 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
CACNB3-202ENST00000536187 TOM1O60784 492 aa24.24■■□□□ 1.47
CACNB3-202ENST00000536187 TNS3Q68CZ2 1445 aa24.24■■□□□ 1.47
CACNB3-202ENST00000536187 SBNO1A3KN83 1393 aa24.24■■□□□ 1.47
CACNB3-202ENST00000536187 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
CACNB3-202ENST00000536187 MED1Q15648 1581 aaPredicted RBP24.23■■□□□ 1.47
CACNB3-202ENST00000536187 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
CACNB3-202ENST00000536187 NLRP13Q86W25 1043 aa24.23■■□□□ 1.47
CACNB3-202ENST00000536187 MRS2Q9HD23 443 aa24.23■■□□□ 1.47
CACNB3-202ENST00000536187 AHDC1Q5TGY3 1603 aaPredicted RBP24.23■■□□□ 1.47
CACNB3-202ENST00000536187 SPATA31A3Q5VYP0 1347 aa24.22■■□□□ 1.47
CACNB3-202ENST00000536187 RRS1Q15050 365 aaKnown RBP24.22■■□□□ 1.47
CACNB3-202ENST00000536187 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
CACNB3-202ENST00000536187 MTHFSP49914 203 aa24.2■■□□□ 1.46
CACNB3-202ENST00000536187 PEAK1Q9H792 1746 aa24.2■■□□□ 1.46
CACNB3-202ENST00000536187 CRYBG1Q9Y4K1 1723 aa24.2■■□□□ 1.46
CACNB3-202ENST00000536187 POLKQ9UBT6 870 aa24.19■■□□□ 1.46
CACNB3-202ENST00000536187 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
CACNB3-202ENST00000536187 NFAT5O94916 1531 aa24.19■■□□□ 1.46
CACNB3-202ENST00000536187 PHLPP1O60346 1717 aa24.18■■□□□ 1.46
CACNB3-202ENST00000536187 COL16A1Q07092 1604 aaPredicted RBP24.18■■□□□ 1.46
CACNB3-202ENST00000536187 SLIT3O75094 1523 aa24.17■■□□□ 1.46
CACNB3-202ENST00000536187 USP19O94966 1318 aa24.16■■□□□ 1.46
CACNB3-202ENST00000536187 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
CACNB3-202ENST00000536187 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
CACNB3-202ENST00000536187 SMG6Q86US8 1419 aaKnown RBP24.14■■□□□ 1.46
CACNB3-202ENST00000536187 COL3A1P02461 1466 aaPredicted RBP24.14■■□□□ 1.46
CACNB3-202ENST00000536187 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
CACNB3-202ENST00000536187 SHPRHQ149N8 1683 aa24.14■■□□□ 1.45
CACNB3-202ENST00000536187 LTN1O94822 1766 aa24.13■■□□□ 1.45
CACNB3-202ENST00000536187 MAP3K19Q56UN5 1328 aa24.13■■□□□ 1.45
CACNB3-202ENST00000536187 ABCA3Q99758 1704 aa24.13■■□□□ 1.45
CACNB3-202ENST00000536187 GCP02774 474 aa24.11■■□□□ 1.45
CACNB3-202ENST00000536187 PNISRQ8TF01 805 aaKnown RBP24.11■■□□□ 1.45
CACNB3-202ENST00000536187 ARHGEF10O15013 1369 aa24.11■■□□□ 1.45
CACNB3-202ENST00000536187 FAM9BQ8IZU0 186 aa24.1■■□□□ 1.45
CACNB3-202ENST00000536187 PNPLA6Q8IY17 1366 aa24.09■■□□□ 1.45
CACNB3-202ENST00000536187 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.44
CACNB3-202ENST00000536187 ZBTB7CA1YPR0 619 aa24.06■■□□□ 1.44
CACNB3-202ENST00000536187 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
CACNB3-202ENST00000536187 HSP90AB2PQ58FF8 381 aa24.06■■□□□ 1.44
CACNB3-202ENST00000536187 LRRC59Q96AG4 307 aaKnown RBP24.05■■□□□ 1.44
CACNB3-202ENST00000536187 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
CACNB3-202ENST00000536187 KCNH5Q8NCM2 988 aa24.04■■□□□ 1.44
CACNB3-202ENST00000536187 YTHDC1Q96MU7 727 aaKnown RBP24.04■■□□□ 1.44
CACNB3-202ENST00000536187 COL22A1Q8NFW1 1626 aaPredicted RBP24.04■■□□□ 1.44
CACNB3-202ENST00000536187 ARHGEF25Q86VW2 580 aa24.03■■□□□ 1.44
CACNB3-202ENST00000536187 INSRP06213 1382 aa24.02■■□□□ 1.44
CACNB3-202ENST00000536187 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
CACNB3-202ENST00000536187 HOXC9P31274 260 aa24.01■■□□□ 1.43
CACNB3-202ENST00000536187 FLT4P35916 1363 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 KIAA0232Q92628 1395 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 COL18A1P39060 1754 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 HSPA1LP34931 641 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 AMPHP49418 695 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
CACNB3-202ENST00000536187 CHRNA2Q15822 529 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms