RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TRIM27P14373 513 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 IL16Q14005 1332 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 KLHL40Q2TBA0 621 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 CD109Q6YHK3 1445 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 MROH1Q8NDA8 1641 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-215ENST00000536145 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
CPSF7-215ENST00000536145 MROH2AA6NES4 1674 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 ADGRB1O14514 1584 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 ABCC11Q96J66 1382 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 ADGRF5Q8IZF2 1346 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 KIF16BQ96L93 1317 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-215ENST00000536145 SSFA2P28290 1259 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 BMP2KLQ5H9B9 411 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 CFAP70Q5T0N1 1121 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 CYB5RLQ6IPT4 315 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
CPSF7-215ENST00000536145 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
CPSF7-215ENST00000536145 ARAP3Q8WWN8 1544 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 FANCAO15360 1455 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 NSD2O96028 1365 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 BAG4O95429 457 aaKnown RBP8.65□□□□□ -1.02
CPSF7-215ENST00000536145 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-215ENST00000536145 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-215ENST00000536145 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 MORC1Q86VD1 984 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 SSH1Q8WYL5 1049 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 PLEKHF1Q96S99 279 aa8.65□□□□□ -1.02
CPSF7-215ENST00000536145 NOL7Q9UMY1 257 aaKnown RBP8.65□□□□□ -1.02
CPSF7-215ENST00000536145 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
CPSF7-215ENST00000536145 EXOSC9Q06265 439 aaKnown RBP8.64□□□□□ -1.03
CPSF7-215ENST00000536145 CHD1LQ86WJ1 897 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-215ENST00000536145 TMEM57Q8N5G2 664 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 LMTK2Q8IWU2 1503 aa8.64□□□□□ -1.03
CPSF7-215ENST00000536145 YEATS2Q9ULM3 1422 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 MTHFSP49914 203 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 RBSNQ9H1K0 784 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 LMBRD1Q9NUN5 540 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 CHD1O14646 1710 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
CPSF7-215ENST00000536145 CDC42BPGQ6DT37 1551 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 UGGT1Q9NYU2 1555 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 MCM5P33992 734 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 SMC4Q9NTJ3 1288 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 NOB1Q9ULX3 412 aaKnown RBP8.62□□□□□ -1.03
CPSF7-215ENST00000536145 PTCH1Q13635 1447 aa8.62□□□□□ -1.03
CPSF7-215ENST00000536145 KIF1BO60333 1816 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 TULP4Q9NRJ4 1543 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 TMPOP42166 694 aaKnown RBP8.61□□□□□ -1.03
CPSF7-215ENST00000536145 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 FTSJ3Q8IY81 847 aaKnown RBP8.61□□□□□ -1.03
CPSF7-215ENST00000536145 TSR2Q969E8 191 aaKnown RBP8.61□□□□□ -1.03
CPSF7-215ENST00000536145 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
CPSF7-215ENST00000536145 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 ZKSCAN5Q9Y2L8 839 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
CPSF7-215ENST00000536145 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 EFCAB2Q5VUJ9 269 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 MTERF4Q7Z6M4 381 aaKnown RBP8.6□□□□□ -1.03
CPSF7-215ENST00000536145 ITPRIPQ8IWB1 547 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 PPLO60437 1756 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 ANKRD26Q9UPS8 1709 aa8.6□□□□□ -1.03
CPSF7-215ENST00000536145 UHRF1BP1LA0JNW5 1464 aa8.59□□□□□ -1.03
CPSF7-215ENST00000536145 ZBTB7BO15156 539 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-215ENST00000536145 NUCB2P80303 420 aa8.59□□□□□ -1.03
CPSF7-215ENST00000536145 RBM10P98175 930 aaKnown RBP8.59□□□□□ -1.03
CPSF7-215ENST00000536145 RABEP1Q15276 862 aa8.59□□□□□ -1.03
CPSF7-215ENST00000536145 C14orf93Q9H972 538 aaKnown RBP8.59□□□□□ -1.03
CPSF7-215ENST00000536145 R3HCC1Q9Y3T6 440 aaKnown RBP8.59□□□□□ -1.03
CPSF7-215ENST00000536145 DDX49Q9Y6V7 483 aaKnown RBP8.59□□□□□ -1.03
CPSF7-215ENST00000536145 ATP7AQ04656 1500 aa8.59□□□□□ -1.03
CPSF7-215ENST00000536145 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 GOLGA6L22H0YM25 854 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 IPO8O15397 1037 aaKnown RBP8.58□□□□□ -1.04
CPSF7-215ENST00000536145 CDC45O75419 566 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 NPM1P06748 294 aaKnown RBP eCLIP8.58□□□□□ -1.04
CPSF7-215ENST00000536145 UQCRHP07919 91 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 MSNP26038 577 aaKnown RBP8.58□□□□□ -1.04
CPSF7-215ENST00000536145 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 UTP14CQ5TAP6 766 aaKnown RBP8.58□□□□□ -1.04
CPSF7-215ENST00000536145 SASS6Q6UVJ0 657 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 SIRT2Q8IXJ6 389 aa8.58□□□□□ -1.04
CPSF7-215ENST00000536145 ZDHHC9Q9Y397 364 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms