RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 MYOM1P52179 1685 aa16.53■□□□□ 0.24
VAMP1-204ENST00000535180 NRXN1Q9ULB1 1477 aa16.52■□□□□ 0.23
VAMP1-204ENST00000535180 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-204ENST00000535180 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
VAMP1-204ENST00000535180 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
VAMP1-204ENST00000535180 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
VAMP1-204ENST00000535180 RGPD3A6NKT7 1758 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-204ENST00000535180 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
VAMP1-204ENST00000535180 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
VAMP1-204ENST00000535180 STK26Q9P289 416 aa16.48■□□□□ 0.23
VAMP1-204ENST00000535180 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
VAMP1-204ENST00000535180 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
VAMP1-204ENST00000535180 PTGER2P43116 358 aa16.45■□□□□ 0.22
VAMP1-204ENST00000535180 PDE3BQ13370 1112 aa16.45■□□□□ 0.22
VAMP1-204ENST00000535180 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
VAMP1-204ENST00000535180 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
VAMP1-204ENST00000535180 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
VAMP1-204ENST00000535180 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-204ENST00000535180 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
VAMP1-204ENST00000535180 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
VAMP1-204ENST00000535180 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
VAMP1-204ENST00000535180 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
VAMP1-204ENST00000535180 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
VAMP1-204ENST00000535180 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-204ENST00000535180 PLSCR1O15162 318 aa16.39■□□□□ 0.21
VAMP1-204ENST00000535180 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
VAMP1-204ENST00000535180 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
VAMP1-204ENST00000535180 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
VAMP1-204ENST00000535180 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
VAMP1-204ENST00000535180 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
VAMP1-204ENST00000535180 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-204ENST00000535180 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
VAMP1-204ENST00000535180 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
VAMP1-204ENST00000535180 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
VAMP1-204ENST00000535180 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-204ENST00000535180 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
VAMP1-204ENST00000535180 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
VAMP1-204ENST00000535180 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
VAMP1-204ENST00000535180 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
VAMP1-204ENST00000535180 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
VAMP1-204ENST00000535180 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
VAMP1-204ENST00000535180 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
VAMP1-204ENST00000535180 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
VAMP1-204ENST00000535180 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-204ENST00000535180 SSH2Q76I76 1423 aa16.33■□□□□ 0.2
VAMP1-204ENST00000535180 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
VAMP1-204ENST00000535180 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
VAMP1-204ENST00000535180 MTFR1LQ9H019 292 aa16.32■□□□□ 0.2
VAMP1-204ENST00000535180 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
VAMP1-204ENST00000535180 ITGAEP38570 1179 aa16.31■□□□□ 0.2
VAMP1-204ENST00000535180 EVA1CP58658 441 aa16.31■□□□□ 0.2
VAMP1-204ENST00000535180 GPR162Q16538 588 aa16.31■□□□□ 0.2
VAMP1-204ENST00000535180 PROM2Q8N271 834 aa16.31■□□□□ 0.2
VAMP1-204ENST00000535180 OVOS2A0A0G2JMS6 1433 aa16.3■□□□□ 0.2
VAMP1-204ENST00000535180 OVOS2A0A0J9YW53 1432 aa16.3■□□□□ 0.2
VAMP1-204ENST00000535180 OVOS2Q6IE36 1432 aa16.3■□□□□ 0.2
VAMP1-204ENST00000535180 PIK3C2GO75747 1445 aa16.29■□□□□ 0.2
VAMP1-204ENST00000535180 ANKRD30BQ9BXX2 1392 aa16.29■□□□□ 0.2
VAMP1-204ENST00000535180 ARXQ96QS3 562 aa16.29■□□□□ 0.2
VAMP1-204ENST00000535180 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
VAMP1-204ENST00000535180 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
VAMP1-204ENST00000535180 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
VAMP1-204ENST00000535180 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
VAMP1-204ENST00000535180 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
VAMP1-204ENST00000535180 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
VAMP1-204ENST00000535180 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
VAMP1-204ENST00000535180 ZC3H6P61129 1189 aaKnown RBP16.27■□□□□ 0.2
VAMP1-204ENST00000535180 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
VAMP1-204ENST00000535180 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.19
VAMP1-204ENST00000535180 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
VAMP1-204ENST00000535180 HSPA6P17066 643 aa16.25■□□□□ 0.19
VAMP1-204ENST00000535180 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
VAMP1-204ENST00000535180 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
VAMP1-204ENST00000535180 ATP7BP35670 1465 aa16.24■□□□□ 0.19
VAMP1-204ENST00000535180 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
VAMP1-204ENST00000535180 RGL3Q3MIN7 710 aa16.24■□□□□ 0.19
VAMP1-204ENST00000535180 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
VAMP1-204ENST00000535180 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
VAMP1-204ENST00000535180 PRR36Q9H6K5 1346 aa16.22■□□□□ 0.19
VAMP1-204ENST00000535180 TXNRD1Q16881 649 aa16.22■□□□□ 0.19
VAMP1-204ENST00000535180 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
VAMP1-204ENST00000535180 TULP4Q9NRJ4 1543 aa16.22■□□□□ 0.19
VAMP1-204ENST00000535180 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
VAMP1-204ENST00000535180 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
VAMP1-204ENST00000535180 WNK3Q9BYP7 1800 aa16.2■□□□□ 0.18
VAMP1-204ENST00000535180 POGKQ9P215 609 aa16.2■□□□□ 0.18
VAMP1-204ENST00000535180 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
VAMP1-204ENST00000535180 BCL9O00512 1426 aa16.19■□□□□ 0.18
VAMP1-204ENST00000535180 CPDO75976 1380 aa16.18■□□□□ 0.18
VAMP1-204ENST00000535180 DDB1Q16531 1140 aa16.18■□□□□ 0.18
VAMP1-204ENST00000535180 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
VAMP1-204ENST00000535180 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
VAMP1-204ENST00000535180 CRB1P82279 1406 aa16.18■□□□□ 0.18
VAMP1-204ENST00000535180 COL5A2P05997 1499 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-204ENST00000535180 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
VAMP1-204ENST00000535180 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
VAMP1-204ENST00000535180 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-204ENST00000535180 TOPAZ1Q8N9V7 1692 aa16.16■□□□□ 0.18
VAMP1-204ENST00000535180 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
VAMP1-204ENST00000535180 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms