RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 NOS1P29475 1434 aa16.25■□□□□ 0.19
TNC-209ENST00000534839 SLIT2O94813 1529 aa16.24■□□□□ 0.19
TNC-209ENST00000534839 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
TNC-209ENST00000534839 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
TNC-209ENST00000534839 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 UTRNP46939 3433 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 DISP2A7MBM2 1401 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
TNC-209ENST00000534839 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
TNC-209ENST00000534839 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
TNC-209ENST00000534839 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
TNC-209ENST00000534839 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
TNC-209ENST00000534839 KCNQ2O43526 872 aa16.19■□□□□ 0.18
TNC-209ENST00000534839 TRIM35Q9UPQ4 493 aa16.19■□□□□ 0.18
TNC-209ENST00000534839 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
TNC-209ENST00000534839 STK25O00506 426 aa16.18■□□□□ 0.18
TNC-209ENST00000534839 CAMKK2Q96RR4 588 aa16.18■□□□□ 0.18
TNC-209ENST00000534839 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
TNC-209ENST00000534839 XRN1Q8IZH2 1706 aaKnown RBP16.18■□□□□ 0.18
TNC-209ENST00000534839 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
TNC-209ENST00000534839 VPS72Q15906 364 aa16.17■□□□□ 0.18
TNC-209ENST00000534839 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
TNC-209ENST00000534839 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
TNC-209ENST00000534839 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
TNC-209ENST00000534839 SLC34A2O95436 690 aa16.16■□□□□ 0.18
TNC-209ENST00000534839 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
TNC-209ENST00000534839 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
TNC-209ENST00000534839 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
TNC-209ENST00000534839 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
TNC-209ENST00000534839 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
TNC-209ENST00000534839 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
TNC-209ENST00000534839 CCDC9Q9Y3X0 531 aaKnown RBP16.15■□□□□ 0.18
TNC-209ENST00000534839 STK24Q9Y6E0 443 aa16.15■□□□□ 0.18
TNC-209ENST00000534839 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
TNC-209ENST00000534839 KANK1Q14678 1352 aa16.14■□□□□ 0.17
TNC-209ENST00000534839 A0A0G2JS52 829 aa16.14■□□□□ 0.17
TNC-209ENST00000534839 MYT1Q01538 1121 aa16.14■□□□□ 0.17
TNC-209ENST00000534839 HS6ST3Q8IZP7 471 aa16.12■□□□□ 0.17
TNC-209ENST00000534839 CHD4Q14839 1912 aa16.11■□□□□ 0.17
TNC-209ENST00000534839 ERBINQ96RT1 1412 aa16.1■□□□□ 0.17
TNC-209ENST00000534839 PXDNQ92626 1479 aa16.09■□□□□ 0.17
TNC-209ENST00000534839 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
TNC-209ENST00000534839 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 EFCAB3Q8N7B9 438 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 KIF15Q9NS87 1388 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 RREB1Q92766 1687 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
TNC-209ENST00000534839 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
TNC-209ENST00000534839 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
TNC-209ENST00000534839 ADGRB2O60241 1585 aa16.06■□□□□ 0.16
TNC-209ENST00000534839 NRKQ7Z2Y5 1582 aa16.06■□□□□ 0.16
TNC-209ENST00000534839 PARD3Q8TEW0 1356 aa16.06■□□□□ 0.16
TNC-209ENST00000534839 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
TNC-209ENST00000534839 NPHP3Q7Z494 1330 aa16.05■□□□□ 0.16
TNC-209ENST00000534839 APBA3O96018 575 aa16.05■□□□□ 0.16
TNC-209ENST00000534839 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
TNC-209ENST00000534839 METP08581 1390 aa16.04■□□□□ 0.16
TNC-209ENST00000534839 TRIM37O94972 964 aa16.04■□□□□ 0.16
TNC-209ENST00000534839 NRXN3Q9Y4C0 1643 aa16.04■□□□□ 0.16
TNC-209ENST00000534839 PLCH1Q4KWH8 1693 aa16.03■□□□□ 0.16
TNC-209ENST00000534839 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
TNC-209ENST00000534839 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
TNC-209ENST00000534839 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
TNC-209ENST00000534839 NWD2Q9ULI1 1742 aa16.02■□□□□ 0.15
TNC-209ENST00000534839 SLC39A7Q92504 469 aa16.01■□□□□ 0.15
TNC-209ENST00000534839 METRNQ9UJH8 293 aa16.01■□□□□ 0.15
TNC-209ENST00000534839 COLQQ9Y215 455 aaPredicted RBP16.01■□□□□ 0.15
TNC-209ENST00000534839 MYOM1P52179 1685 aa16.01■□□□□ 0.15
TNC-209ENST00000534839 FOXO3O43524 673 aa16■□□□□ 0.15
TNC-209ENST00000534839 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
TNC-209ENST00000534839 SYT17Q9BSW7 474 aa16■□□□□ 0.15
TNC-209ENST00000534839 C7P10643 843 aa15.99■□□□□ 0.15
TNC-209ENST00000534839 MKRN3Q13064 507 aaKnown RBP15.99■□□□□ 0.15
TNC-209ENST00000534839 ESCO1Q5FWF5 840 aa15.99■□□□□ 0.15
TNC-209ENST00000534839 HSPA6P17066 643 aa15.98■□□□□ 0.15
TNC-209ENST00000534839 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
TNC-209ENST00000534839 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
TNC-209ENST00000534839 IER5LQ5T953 404 aa15.97■□□□□ 0.15
TNC-209ENST00000534839 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
TNC-209ENST00000534839 PTGER2P43116 358 aa15.96■□□□□ 0.15
TNC-209ENST00000534839 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
TNC-209ENST00000534839 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
TNC-209ENST00000534839 PRELPP51888 382 aa15.95■□□□□ 0.14
TNC-209ENST00000534839 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
TNC-209ENST00000534839 COL13A1Q5TAT6 717 aaPredicted RBP15.94■□□□□ 0.14
TNC-209ENST00000534839 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 MFRPQ9BY79 579 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
TNC-209ENST00000534839 PCDH10Q9P2E7 1040 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 CASZ1Q86V15 1759 aa15.94■□□□□ 0.14
TNC-209ENST00000534839 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
TNC-209ENST00000534839 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
TNC-209ENST00000534839 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
TNC-209ENST00000534839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms