RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 ITSN1Q15811 1721 aa8.77□□□□□ -1.01
NPIPA1-204ENST00000534720 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1.01
NPIPA1-204ENST00000534720 PLEKHH1Q9ULM0 1364 aa8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 CHD2O14647 1828 aaKnown RBP8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 CHADLQ6NUI6 762 aa8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 WAPLQ7Z5K2 1190 aa8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 CDK19Q9BWU1 502 aa8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 XRN1Q8IZH2 1706 aaKnown RBP8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 NUBP1P53384 320 aa8.76□□□□□ -1.01
NPIPA1-204ENST00000534720 NSD2O96028 1365 aa8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 HAP1P54257 671 aaPredicted RBP8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 TBX22Q9Y458 520 aa8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 MON2Q7Z3U7 1717 aa8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 CD163L1Q9NR16 1453 aa8.75□□□□□ -1.01
NPIPA1-204ENST00000534720 ATP7BP35670 1465 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 TOPAZ1Q8N9V7 1692 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 PTPRUQ92729 1446 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 A0A1W2PP64 1363 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 CGNL1Q0VF96 1302 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 WASLO00401 505 aaPredicted RBP8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 TERF2IPQ9NYB0 399 aa8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 BLMP54132 1417 aaPredicted RBP8.74□□□□□ -1.01
NPIPA1-204ENST00000534720 SHPRHQ149N8 1683 aa8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 PTCH1Q13635 1447 aa8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
NPIPA1-204ENST00000534720 CDC42BPGQ6DT37 1551 aa8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 HDGFL2Q7Z4V5 671 aaPredicted RBP8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 MAP2P11137 1827 aaKnown RBP8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 MORC1Q86VD1 984 aa8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
NPIPA1-204ENST00000534720 ANKLE2Q86XL3 938 aa8.71□□□□□ -1.02
NPIPA1-204ENST00000534720 POLR3AO14802 1390 aaPredicted RBP8.71□□□□□ -1.02
NPIPA1-204ENST00000534720 PPIP5K1Q6PFW1 1433 aa8.71□□□□□ -1.02
NPIPA1-204ENST00000534720 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 FARP1Q9Y4F1 1045 aaPredicted RBP8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 WDR43Q15061 677 aaKnown RBP eCLIP8.7□□□□□ -1.02
NPIPA1-204ENST00000534720 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 GSE1Q14687 1217 aa8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 SMG6Q86US8 1419 aaKnown RBP8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 NRKQ7Z2Y5 1582 aa8.69□□□□□ -1.02
NPIPA1-204ENST00000534720 RASEFQ8IZ41 740 aa8.68□□□□□ -1.02
NPIPA1-204ENST00000534720 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
NPIPA1-204ENST00000534720 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
NPIPA1-204ENST00000534720 EDC4Q6P2E9 1401 aaKnown RBP8.68□□□□□ -1.02
NPIPA1-204ENST00000534720 FAM212AQ96EL1 285 aa8.68□□□□□ -1.02
NPIPA1-204ENST00000534720 NALCNQ8IZF0 1738 aa8.67□□□□□ -1.02
NPIPA1-204ENST00000534720 FYB1O15117 783 aa8.67□□□□□ -1.02
NPIPA1-204ENST00000534720 PDE3BQ13370 1112 aa8.67□□□□□ -1.02
NPIPA1-204ENST00000534720 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
NPIPA1-204ENST00000534720 PRR36Q9H6K5 1346 aa8.67□□□□□ -1.02
NPIPA1-204ENST00000534720 NPHP4O75161 1426 aaPredicted RBP8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 NEFLP07196 543 aa8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 CFAP53Q96M91 514 aa8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 SUPT16HQ9Y5B9 1047 aaKnown RBP8.66□□□□□ -1.02
NPIPA1-204ENST00000534720 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
NPIPA1-204ENST00000534720 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
NPIPA1-204ENST00000534720 TNNT2P45379 298 aaPredicted RBP8.65□□□□□ -1.02
NPIPA1-204ENST00000534720 MTHFSP49914 203 aa8.65□□□□□ -1.02
NPIPA1-204ENST00000534720 NKTRP30414 1462 aaKnown RBP8.65□□□□□ -1.03
NPIPA1-204ENST00000534720 KCNA6P17658 529 aa8.64□□□□□ -1.03
NPIPA1-204ENST00000534720 ANKARQ7Z5J8 1434 aa8.64□□□□□ -1.03
NPIPA1-204ENST00000534720 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
NPIPA1-204ENST00000534720 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
NPIPA1-204ENST00000534720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
NPIPA1-204ENST00000534720 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
NPIPA1-204ENST00000534720 USP54Q70EL1 1684 aa8.63□□□□□ -1.03
NPIPA1-204ENST00000534720 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 ACEP12821 1306 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 RGL2O15211 777 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 LHX8Q68G74 356 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 USP6P35125 1406 aa8.62□□□□□ -1.03
NPIPA1-204ENST00000534720 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
NPIPA1-204ENST00000534720 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
NPIPA1-204ENST00000534720 ZNF521Q96K83 1311 aa8.61□□□□□ -1.03
NPIPA1-204ENST00000534720 SSH2Q76I76 1423 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 ADGRL3Q9HAR2 1447 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 TTC21BQ7Z4L5 1316 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 NME9Q86XW9 330 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 CCDC146Q8IYE0 955 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 VSIG10Q8N0Z9 540 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms