RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
CHKA-208ENST00000533910 CDC42BPBQ9Y5S2 1711 aa8.49□□□□□ -1.05
CHKA-208ENST00000533910 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
CHKA-208ENST00000533910 ZEB1P37275 1124 aaPredicted RBP8.48□□□□□ -1.05
CHKA-208ENST00000533910 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
CHKA-208ENST00000533910 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
CHKA-208ENST00000533910 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
CHKA-208ENST00000533910 CAMSAP2Q08AD1 1489 aa8.48□□□□□ -1.05
CHKA-208ENST00000533910 ADGBQ8N7X0 1667 aa8.48□□□□□ -1.05
CHKA-208ENST00000533910 HFM1A2PYH4 1435 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 PTPRKQ15262 1439 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 RGS20O76081 388 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 CERKQ8TCT0 537 aa8.47□□□□□ -1.05
CHKA-208ENST00000533910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHKA-208ENST00000533910 BCAMP50895 628 aa8.46□□□□□ -1.06
CHKA-208ENST00000533910 FAM50AQ14320 339 aaKnown RBP8.46□□□□□ -1.06
CHKA-208ENST00000533910 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
CHKA-208ENST00000533910 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
CHKA-208ENST00000533910 TSKSQ9UJT2 592 aa8.46□□□□□ -1.06
CHKA-208ENST00000533910 DAPK1P53355 1430 aa8.46□□□□□ -1.06
CHKA-208ENST00000533910 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
CHKA-208ENST00000533910 ARAP3Q8WWN8 1544 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 ARHGEF5Q12774 1597 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 SAMD9LQ8IVG5 1584 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 FLIIQ13045 1269 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 TBC1D2Q9BYX2 928 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
CHKA-208ENST00000533910 ABCA9Q8IUA7 1624 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 SMAPO00193 183 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 APBB1O00213 710 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 RBM46Q8TBY0 533 aaKnown RBP8.44□□□□□ -1.06
CHKA-208ENST00000533910 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
CHKA-208ENST00000533910 POM121Q96HA1 1249 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 EYA1Q99502 592 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 DHX57Q6P158 1386 aaKnown RBP8.44□□□□□ -1.06
CHKA-208ENST00000533910 ADGRL2O95490 1459 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
CHKA-208ENST00000533910 MCM6Q14566 821 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 ROCK1Q13464 1354 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 ABCC5O15440 1437 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 NAIPQ13075 1403 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 RIMBP3CA6NJZ7 1639 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 RIMBP3BA6NNM3 1639 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 RIMBP3Q9UFD9 1639 aa8.43□□□□□ -1.06
CHKA-208ENST00000533910 A0A0G2JS52 829 aa8.42□□□□□ -1.06
CHKA-208ENST00000533910 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
CHKA-208ENST00000533910 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
CHKA-208ENST00000533910 CLSPNQ9HAW4 1339 aa8.42□□□□□ -1.06
CHKA-208ENST00000533910 MAST1Q9Y2H9 1570 aa8.41□□□□□ -1.06
CHKA-208ENST00000533910 MAPKBP1O60336 1514 aa8.41□□□□□ -1.06
CHKA-208ENST00000533910 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
CHKA-208ENST00000533910 ITGAEP38570 1179 aa8.41□□□□□ -1.06
CHKA-208ENST00000533910 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHKA-208ENST00000533910 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
CHKA-208ENST00000533910 ABCC1P33527 1531 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 ARHGAP5Q13017 1502 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 MBD5Q9P267 1494 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
CHKA-208ENST00000533910 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 SPIRE2Q8WWL2 714 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.06
CHKA-208ENST00000533910 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
CHKA-208ENST00000533910 KDM6BO15054 1643 aa8.4□□□□□ -1.07
CHKA-208ENST00000533910 SYCP2Q9BX26 1530 aa8.39□□□□□ -1.07
CHKA-208ENST00000533910 PLEKHH2Q8IVE3 1493 aa8.39□□□□□ -1.07
CHKA-208ENST00000533910 PLXNC1O60486 1568 aa8.39□□□□□ -1.07
CHKA-208ENST00000533910 CCDC141Q6ZP82 1450 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 PLCH2O75038 1416 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 ASXL2Q76L83 1435 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 KIAA1107Q9UPP5 1409 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 ZNF644Q9H582 1327 aaPredicted RBP8.38□□□□□ -1.07
CHKA-208ENST00000533910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
CHKA-208ENST00000533910 TRAK2O60296 914 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 NDUFV2P19404 249 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 TATDN2Q93075 761 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
CHKA-208ENST00000533910 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 CD46P15529 392 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 RFC5P40937 340 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 KCNC4Q03721 635 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 ZNF777Q9ULD5 760 aaPredicted RBP8.37□□□□□ -1.07
CHKA-208ENST00000533910 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 C9orf84Q5VXU9 1444 aa8.37□□□□□ -1.07
CHKA-208ENST00000533910 CFAP74Q9C0B2 1584 aa8.36□□□□□ -1.07
CHKA-208ENST00000533910 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
CHKA-208ENST00000533910 A6NJR5 290 aa8.36□□□□□ -1.07
CHKA-208ENST00000533910 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
CHKA-208ENST00000533910 PPP4CP60510 307 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms