RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
PACS1-213ENST00000533756 MYOM1P52179 1685 aa13.98□□□□□ -0.17
PACS1-213ENST00000533756 SPATA31A1Q5TZJ5 1347 aa13.97□□□□□ -0.17
PACS1-213ENST00000533756 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
PACS1-213ENST00000533756 HSPA6P17066 643 aa13.97□□□□□ -0.17
PACS1-213ENST00000533756 DLC1Q96QB1 1528 aa13.96□□□□□ -0.17
PACS1-213ENST00000533756 PLSCR1O15162 318 aa13.96□□□□□ -0.17
PACS1-213ENST00000533756 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
PACS1-213ENST00000533756 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
PACS1-213ENST00000533756 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
PACS1-213ENST00000533756 PDGFDQ9GZP0 370 aaPredicted RBP13.95□□□□□ -0.18
PACS1-213ENST00000533756 GPR162Q16538 588 aa13.94□□□□□ -0.18
PACS1-213ENST00000533756 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
PACS1-213ENST00000533756 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
PACS1-213ENST00000533756 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
PACS1-213ENST00000533756 NUP155O75694 1391 aa13.93□□□□□ -0.18
PACS1-213ENST00000533756 SLC34A2O95436 690 aa13.92□□□□□ -0.18
PACS1-213ENST00000533756 BARGINQ6ZT62 677 aa13.92□□□□□ -0.18
PACS1-213ENST00000533756 SGIP1Q9BQI5 828 aa13.92□□□□□ -0.18
PACS1-213ENST00000533756 MTFR1LQ9H019 292 aa13.92□□□□□ -0.18
PACS1-213ENST00000533756 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
PACS1-213ENST00000533756 SHANK3Q9BYB0 1731 aa13.9□□□□□ -0.18
PACS1-213ENST00000533756 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
PACS1-213ENST00000533756 ARXQ96QS3 562 aa13.9□□□□□ -0.18
PACS1-213ENST00000533756 NRXN1Q9ULB1 1477 aa13.9□□□□□ -0.18
PACS1-213ENST00000533756 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
PACS1-213ENST00000533756 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
PACS1-213ENST00000533756 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
PACS1-213ENST00000533756 TECPR2O15040 1411 aa13.89□□□□□ -0.19
PACS1-213ENST00000533756 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
PACS1-213ENST00000533756 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
PACS1-213ENST00000533756 PRELPP51888 382 aa13.87□□□□□ -0.19
PACS1-213ENST00000533756 STK32BQ9NY57 414 aa13.86□□□□□ -0.19
PACS1-213ENST00000533756 ABCC11Q96J66 1382 aa13.85□□□□□ -0.19
PACS1-213ENST00000533756 CAPN15O75808 1086 aa13.85□□□□□ -0.19
PACS1-213ENST00000533756 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
PACS1-213ENST00000533756 PROM2Q8N271 834 aa13.85□□□□□ -0.19
PACS1-213ENST00000533756 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
PACS1-213ENST00000533756 STK26Q9P289 416 aa13.84□□□□□ -0.19
PACS1-213ENST00000533756 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
PACS1-213ENST00000533756 USP35Q9P2H5 1018 aa13.84□□□□□ -0.19
PACS1-213ENST00000533756 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.19
PACS1-213ENST00000533756 CLTCL1P53675 1640 aa13.83□□□□□ -0.2
PACS1-213ENST00000533756 SIRT1Q96EB6 747 aa13.83□□□□□ -0.2
PACS1-213ENST00000533756 GPBP1L1Q9HC44 474 aaPredicted RBP13.83□□□□□ -0.2
PACS1-213ENST00000533756 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
PACS1-213ENST00000533756 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
PACS1-213ENST00000533756 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
PACS1-213ENST00000533756 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
PACS1-213ENST00000533756 KIF1BO60333 1816 aa13.82□□□□□ -0.2
PACS1-213ENST00000533756 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
PACS1-213ENST00000533756 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
PACS1-213ENST00000533756 EVA1CP58658 441 aa13.81□□□□□ -0.2
PACS1-213ENST00000533756 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
PACS1-213ENST00000533756 APLP1P51693 650 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 DNAJC5GQ8N7S2 189 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 PMFBP1Q8TBY8 1022 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
PACS1-213ENST00000533756 ROCK1Q13464 1354 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 OVOS2A0A0J9YW53 1432 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 OVOS2Q6IE36 1432 aa13.8□□□□□ -0.2
PACS1-213ENST00000533756 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
PACS1-213ENST00000533756 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
PACS1-213ENST00000533756 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
PACS1-213ENST00000533756 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
PACS1-213ENST00000533756 APLP2Q06481 763 aa13.78□□□□□ -0.2
PACS1-213ENST00000533756 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
PACS1-213ENST00000533756 TNS4Q8IZW8 715 aa13.78□□□□□ -0.2
PACS1-213ENST00000533756 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
PACS1-213ENST00000533756 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
PACS1-213ENST00000533756 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
PACS1-213ENST00000533756 CRYBG1Q9Y4K1 1723 aa13.76□□□□□ -0.21
PACS1-213ENST00000533756 GOLGB1Q14789 3259 aaKnown RBP13.76□□□□□ -0.21
PACS1-213ENST00000533756 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
PACS1-213ENST00000533756 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
PACS1-213ENST00000533756 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
PACS1-213ENST00000533756 ACIN1Q9UKV3 1341 aaKnown RBP13.75□□□□□ -0.21
PACS1-213ENST00000533756 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
PACS1-213ENST00000533756 PARP4Q9UKK3 1724 aaKnown RBP13.74□□□□□ -0.21
PACS1-213ENST00000533756 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
PACS1-213ENST00000533756 PTF1AQ7RTS3 328 aa13.74□□□□□ -0.21
PACS1-213ENST00000533756 PPLO60437 1756 aa13.73□□□□□ -0.21
PACS1-213ENST00000533756 ZC3H6P61129 1189 aaKnown RBP13.73□□□□□ -0.21
PACS1-213ENST00000533756 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
PACS1-213ENST00000533756 BCL9O00512 1426 aa13.73□□□□□ -0.21
PACS1-213ENST00000533756 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
PACS1-213ENST00000533756 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
PACS1-213ENST00000533756 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
PACS1-213ENST00000533756 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■□□ 17.5
PACS1-213ENST00000533756 POLD1P28340 1107 aa13.72□□□□□ -0.21
PACS1-213ENST00000533756 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
PACS1-213ENST00000533756 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
PACS1-213ENST00000533756 ATP7BP35670 1465 aa13.72□□□□□ -0.21
PACS1-213ENST00000533756 ADGRF5Q8IZF2 1346 aa13.71□□□□□ -0.21
PACS1-213ENST00000533756 DDB1Q16531 1140 aa13.71□□□□□ -0.21
PACS1-213ENST00000533756 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
PACS1-213ENST00000533756 ADCY9O60503 1353 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms