RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 EVA1CP58658 441 aa14.9□□□□□ -0.02
BDNF-218ENST00000533246 NME9Q86XW9 330 aa14.9□□□□□ -0.02
BDNF-218ENST00000533246 VPS37CA5D8V6 355 aaPredicted RBP14.9□□□□□ -0.02
BDNF-218ENST00000533246 MCM10Q7L590 875 aa14.9□□□□□ -0.02
BDNF-218ENST00000533246 RNF214Q8ND24 703 aa14.9□□□□□ -0.02
BDNF-218ENST00000533246 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
BDNF-218ENST00000533246 CDC45O75419 566 aa14.89□□□□□ -0.03
BDNF-218ENST00000533246 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
BDNF-218ENST00000533246 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
BDNF-218ENST00000533246 NRDCO43847 1150 aa14.89□□□□□ -0.03
BDNF-218ENST00000533246 TRAK2O60296 914 aa14.89□□□□□ -0.03
BDNF-218ENST00000533246 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
BDNF-218ENST00000533246 BIVM-ERCC5R4GMW8 1640 aa14.89□□□□□ -0.03
BDNF-218ENST00000533246 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
BDNF-218ENST00000533246 SF3A1Q15459 793 aaKnown RBP14.88□□□□□ -0.03
BDNF-218ENST00000533246 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
BDNF-218ENST00000533246 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
BDNF-218ENST00000533246 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
BDNF-218ENST00000533246 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
BDNF-218ENST00000533246 HDGFL1Q5TGJ6 251 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 H3BQV1 296 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 MAP4K4O95819 1239 aaPredicted RBP14.87□□□□□ -0.03
BDNF-218ENST00000533246 IGHDP01880 384 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
BDNF-218ENST00000533246 CEBPAP49715 358 aaPredicted RBP14.86□□□□□ -0.03
BDNF-218ENST00000533246 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
BDNF-218ENST00000533246 CHD1LQ86WJ1 897 aa14.85□□□□□ -0.03
BDNF-218ENST00000533246 MPNDQ8N594 471 aa14.85□□□□□ -0.03
BDNF-218ENST00000533246 R3HCC1Q9Y3T6 440 aaKnown RBP14.85□□□□□ -0.03
BDNF-218ENST00000533246 FCHSD2O94868 740 aa14.85□□□□□ -0.03
BDNF-218ENST00000533246 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
BDNF-218ENST00000533246 TNNQ9UQP3 1299 aa14.85□□□□□ -0.03
BDNF-218ENST00000533246 FBXW7Q969H0 707 aa14.84□□□□□ -0.03
BDNF-218ENST00000533246 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
BDNF-218ENST00000533246 DDX58O95786 925 aaKnown RBP14.84□□□□□ -0.03
BDNF-218ENST00000533246 CCDC27Q2M243 656 aa14.84□□□□□ -0.03
BDNF-218ENST00000533246 SKOR2Q2VWA4 1001 aaPredicted RBP14.84□□□□□ -0.03
BDNF-218ENST00000533246 CCDC30Q5VVM6 783 aa14.83□□□□□ -0.03
BDNF-218ENST00000533246 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.03
BDNF-218ENST00000533246 TESK2Q96S53 571 aa14.83□□□□□ -0.03
BDNF-218ENST00000533246 FAM83GA6ND36 823 aa14.83□□□□□ -0.04
BDNF-218ENST00000533246 CAVIN1Q6NZI2 390 aaKnown RBP14.83□□□□□ -0.04
BDNF-218ENST00000533246 F6X3S4 739 aa14.83□□□□□ -0.04
BDNF-218ENST00000533246 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
BDNF-218ENST00000533246 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
BDNF-218ENST00000533246 GAS2L2Q8NHY3 880 aa14.83□□□□□ -0.04
BDNF-218ENST00000533246 SIL1Q9H173 461 aa14.83□□□□□ -0.04
BDNF-218ENST00000533246 GNAI3P08754 354 aa14.82□□□□□ -0.04
BDNF-218ENST00000533246 TRIM27P14373 513 aa14.82□□□□□ -0.04
BDNF-218ENST00000533246 CLASRPQ8N2M8 674 aaKnown RBP14.82□□□□□ -0.04
BDNF-218ENST00000533246 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
BDNF-218ENST00000533246 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
BDNF-218ENST00000533246 IPO4Q8TEX9 1081 aaKnown RBP14.82□□□□□ -0.04
BDNF-218ENST00000533246 SMC3Q9UQE7 1217 aa14.82□□□□□ -0.04
BDNF-218ENST00000533246 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
BDNF-218ENST00000533246 KDM4AO75164 1064 aa14.82□□□□□ -0.04
BDNF-218ENST00000533246 PRPF40AO75400 957 aaKnown RBP14.82□□□□□ -0.04
BDNF-218ENST00000533246 GNAI2P04899 355 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
BDNF-218ENST00000533246 ATP10BO94823 1461 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 CUL7Q14999 1698 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 NUCB2P80303 420 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
BDNF-218ENST00000533246 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
BDNF-218ENST00000533246 CGNQ9P2M7 1197 aaKnown RBP14.81□□□□□ -0.04
BDNF-218ENST00000533246 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
BDNF-218ENST00000533246 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
BDNF-218ENST00000533246 RPGRIP1LQ68CZ1 1315 aa14.8□□□□□ -0.04
BDNF-218ENST00000533246 ATF3P18847 181 aa14.8□□□□□ -0.04
BDNF-218ENST00000533246 PROSER2Q86WR7 435 aaPredicted RBP14.8□□□□□ -0.04
BDNF-218ENST00000533246 NOS1P29475 1434 aa14.8□□□□□ -0.04
BDNF-218ENST00000533246 CD109Q6YHK3 1445 aa14.8□□□□□ -0.04
BDNF-218ENST00000533246 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
BDNF-218ENST00000533246 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
BDNF-218ENST00000533246 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
BDNF-218ENST00000533246 ESPNB1AK53 854 aa14.79□□□□□ -0.04
BDNF-218ENST00000533246 MYL6BP14649 208 aa14.79□□□□□ -0.04
BDNF-218ENST00000533246 MTERF4Q7Z6M4 381 aaKnown RBP14.78□□□□□ -0.04
BDNF-218ENST00000533246 BICD2Q8TD16 824 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 ATAD2Q6PL18 1390 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 PHF14O94880 888 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
BDNF-218ENST00000533246 CSPP1Q1MSJ5 1256 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
BDNF-218ENST00000533246 FSD1Q9BTV5 496 aa14.77□□□□□ -0.04
BDNF-218ENST00000533246 C14orf93Q9H972 538 aaKnown RBP14.77□□□□□ -0.04
BDNF-218ENST00000533246 SRGAP3O43295 1099 aa14.77□□□□□ -0.04
BDNF-218ENST00000533246 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.77□□□□□ -0.04
BDNF-218ENST00000533246 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.04
BDNF-218ENST00000533246 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.04
BDNF-218ENST00000533246 HOMEZQ8IX15 550 aa14.77□□□□□ -0.05
BDNF-218ENST00000533246 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.05
BDNF-218ENST00000533246 BECN2A8MW95 431 aa14.76□□□□□ -0.05
BDNF-218ENST00000533246 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms