RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
UBXN1-212ENST00000531625 A0A0G2JS52 829 aa27.95■■■□□ 2.06
UBXN1-212ENST00000531625 MYT1Q01538 1121 aa27.95■■■□□ 2.06
UBXN1-212ENST00000531625 BAG6P46379 1132 aa27.94■■■□□ 2.06
UBXN1-212ENST00000531625 NGDNQ8NEJ9 315 aaKnown RBP27.94■■■□□ 2.06
UBXN1-212ENST00000531625 SPATA31A5Q5VU36 1347 aa27.92■■■□□ 2.06
UBXN1-212ENST00000531625 SPATA31A7Q8IWB4 1347 aa27.92■■■□□ 2.06
UBXN1-212ENST00000531625 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.06
UBXN1-212ENST00000531625 PAK3O75914 559 aaPredicted RBP27.89■■■□□ 2.06
UBXN1-212ENST00000531625 PRDM11Q9NQV5 511 aa27.88■■■□□ 2.05
UBXN1-212ENST00000531625 LRP5O75197 1615 aa27.88■■■□□ 2.05
UBXN1-212ENST00000531625 HRCP23327 699 aa27.86■■■□□ 2.05
UBXN1-212ENST00000531625 NUDT16Q96DE0 195 aaKnown RBP27.86■■■□□ 2.05
UBXN1-212ENST00000531625 ATP7BP35670 1465 aa27.86■■■□□ 2.05
UBXN1-212ENST00000531625 THSD7AQ9UPZ6 1657 aa27.84■■■□□ 2.05
UBXN1-212ENST00000531625 ITSN1Q15811 1721 aa27.84■■■□□ 2.05
UBXN1-212ENST00000531625 ARHGEF28Q8N1W1 1705 aaKnown RBP27.84■■■□□ 2.05
UBXN1-212ENST00000531625 RGPD1P0DJD0 1748 aa27.82■■■□□ 2.04
UBXN1-212ENST00000531625 KIAA0232Q92628 1395 aa27.82■■■□□ 2.04
UBXN1-212ENST00000531625 DISP2A7MBM2 1401 aa27.82■■■□□ 2.04
UBXN1-212ENST00000531625 PSDA5PKW4 1024 aaPredicted RBP27.81■■■□□ 2.04
UBXN1-212ENST00000531625 EN1Q05925 392 aaPredicted RBP27.81■■■□□ 2.04
UBXN1-212ENST00000531625 SPATA31A1Q5TZJ5 1347 aa27.81■■■□□ 2.04
UBXN1-212ENST00000531625 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
UBXN1-212ENST00000531625 CDK19Q9BWU1 502 aa27.79■■■□□ 2.04
UBXN1-212ENST00000531625 POLR3AO14802 1390 aaPredicted RBP27.78■■■□□ 2.04
UBXN1-212ENST00000531625 CHRNA2Q15822 529 aa27.76■■■□□ 2.03
UBXN1-212ENST00000531625 CCDC61Q9Y6R9 512 aa27.76■■■□□ 2.03
UBXN1-212ENST00000531625 PHRF1Q9P1Y6 1649 aaKnown RBP27.75■■■□□ 2.03
UBXN1-212ENST00000531625 ACEP12821 1306 aa27.74■■■□□ 2.03
UBXN1-212ENST00000531625 PLEKHG3A1L390 1219 aa27.74■■■□□ 2.03
UBXN1-212ENST00000531625 ZC3H6P61129 1189 aaKnown RBP27.74■■■□□ 2.03
UBXN1-212ENST00000531625 NBPF8Q3BBV2 869 aa27.74■■■□□ 2.03
UBXN1-212ENST00000531625 FAM196AQ6ZSG2 479 aa27.74■■■□□ 2.03
UBXN1-212ENST00000531625 TNS1Q9HBL0 1735 aaKnown RBP27.73■■■□□ 2.03
UBXN1-212ENST00000531625 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
UBXN1-212ENST00000531625 TOPAZ1Q8N9V7 1692 aa27.72■■■□□ 2.03
UBXN1-212ENST00000531625 NUTM2GQ5VZR2 741 aa27.71■■■□□ 2.03
UBXN1-212ENST00000531625 BARGINQ6ZT62 677 aa27.7■■■□□ 2.02
UBXN1-212ENST00000531625 KIAA1210Q9ULL0 1709 aa27.7■■■□□ 2.02
UBXN1-212ENST00000531625 R3HDM1Q15032 1099 aaKnown RBP27.69■■■□□ 2.02
UBXN1-212ENST00000531625 EZH2Q15910 746 aaKnown RBP27.69■■■□□ 2.02
UBXN1-212ENST00000531625 CAMKK2Q96RR4 588 aa27.69■■■□□ 2.02
UBXN1-212ENST00000531625 SSH2Q76I76 1423 aa27.68■■■□□ 2.02
UBXN1-212ENST00000531625 TRIM37O94972 964 aa27.68■■■□□ 2.02
UBXN1-212ENST00000531625 CPDO75976 1380 aa27.68■■■□□ 2.02
UBXN1-212ENST00000531625 EVA1CP58658 441 aa27.67■■■□□ 2.02
UBXN1-212ENST00000531625 ABTB2Q8N961 1025 aa27.67■■■□□ 2.02
UBXN1-212ENST00000531625 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
UBXN1-212ENST00000531625 USP19O94966 1318 aa27.67■■■□□ 2.02
UBXN1-212ENST00000531625 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
UBXN1-212ENST00000531625 USP35Q9P2H5 1018 aa27.65■■■□□ 2.02
UBXN1-212ENST00000531625 CAMTA1Q9Y6Y1 1673 aa27.65■■■□□ 2.02
UBXN1-212ENST00000531625 PDE3BQ13370 1112 aa27.63■■■□□ 2.01
UBXN1-212ENST00000531625 TCP11L2Q8N4U5 519 aa27.63■■■□□ 2.01
UBXN1-212ENST00000531625 APBA3O96018 575 aa27.62■■■□□ 2.01
UBXN1-212ENST00000531625 NBPF1Q3BBV0 1214 aa27.62■■■□□ 2.01
UBXN1-212ENST00000531625 LARP1Q6PKG0 1096 aaKnown RBP27.62■■■□□ 2.01
UBXN1-212ENST00000531625 NLRP13Q86W25 1043 aa27.62■■■□□ 2.01
UBXN1-212ENST00000531625 LMO7Q8WWI1 1683 aa27.62■■■□□ 2.01
UBXN1-212ENST00000531625 BRD4O60885 1362 aaPredicted RBP27.6■■■□□ 2.01
UBXN1-212ENST00000531625 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
UBXN1-212ENST00000531625 GCP02774 474 aa27.59■■■□□ 2.01
UBXN1-212ENST00000531625 PPIP5K1Q6PFW1 1433 aa27.58■■■□□ 2.01
UBXN1-212ENST00000531625 SRPK2P78362 688 aaKnown RBP27.58■■■□□ 2.01
UBXN1-212ENST00000531625 CENPJQ9HC77 1338 aaPredicted RBP27.58■■■□□ 2.01
UBXN1-212ENST00000531625 C11orf95C9JLR9 678 aaPredicted RBP27.54■■■□□ 2
UBXN1-212ENST00000531625 CABP2Q9NPB3 220 aa27.54■■■□□ 2
UBXN1-212ENST00000531625 RREB1Q92766 1687 aa27.53■■■□□ 2
UBXN1-212ENST00000531625 COL5A2P05997 1499 aaPredicted RBP27.53■■■□□ 2
UBXN1-212ENST00000531625 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
UBXN1-212ENST00000531625 PARP4Q9UKK3 1724 aaKnown RBP27.5■■□□□ 1.99
UBXN1-212ENST00000531625 NBPF14Q5TI25 921 aa27.5■■□□□ 1.99
UBXN1-212ENST00000531625 USP6P35125 1406 aa27.5■■□□□ 1.99
UBXN1-212ENST00000531625 CRB1P82279 1406 aa27.5■■□□□ 1.99
UBXN1-212ENST00000531625 AATKQ6ZMQ8 1374 aa27.49■■□□□ 1.99
UBXN1-212ENST00000531625 CABP1Q9NZU7 370 aa27.49■■□□□ 1.99
UBXN1-212ENST00000531625 NUP188Q5SRE5 1749 aa27.48■■□□□ 1.99
UBXN1-212ENST00000531625 NLRP6P59044 892 aa27.48■■□□□ 1.99
UBXN1-212ENST00000531625 SLIT3O75094 1523 aa27.46■■□□□ 1.99
UBXN1-212ENST00000531625 QRICH2Q9H0J4 1663 aa27.46■■□□□ 1.99
UBXN1-212ENST00000531625 OVOS2A0A0G2JMS6 1433 aa27.43■■□□□ 1.98
UBXN1-212ENST00000531625 OVOS2A0A0J9YW53 1432 aa27.43■■□□□ 1.98
UBXN1-212ENST00000531625 OVOS2Q6IE36 1432 aa27.43■■□□□ 1.98
UBXN1-212ENST00000531625 PEAK1Q9H792 1746 aa27.41■■□□□ 1.98
UBXN1-212ENST00000531625 EVC2Q86UK5 1308 aa27.41■■□□□ 1.98
UBXN1-212ENST00000531625 ZBTB7CA1YPR0 619 aa27.4■■□□□ 1.98
UBXN1-212ENST00000531625 PLSCR1O15162 318 aa27.39■■□□□ 1.98
UBXN1-212ENST00000531625 DDB1Q16531 1140 aa27.39■■□□□ 1.98
UBXN1-212ENST00000531625 COL18A1P39060 1754 aa27.39■■□□□ 1.98
UBXN1-212ENST00000531625 TOM1L2Q6ZVM7 507 aa27.38■■□□□ 1.97
UBXN1-212ENST00000531625 L3MBTL2Q969R5 705 aa27.38■■□□□ 1.97
UBXN1-212ENST00000531625 PIK3C2AO00443 1686 aa27.37■■□□□ 1.97
UBXN1-212ENST00000531625 ZNF692Q9BU19 519 aaPredicted RBP27.37■■□□□ 1.97
UBXN1-212ENST00000531625 SPON1Q9HCB6 807 aa27.37■■□□□ 1.97
UBXN1-212ENST00000531625 RGPD3A6NKT7 1758 aaPredicted RBP27.37■■□□□ 1.97
UBXN1-212ENST00000531625 RGPD4Q7Z3J3 1758 aa27.37■■□□□ 1.97
UBXN1-212ENST00000531625 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
UBXN1-212ENST00000531625 WDR17Q8IZU2 1322 aa27.37■■□□□ 1.97
UBXN1-212ENST00000531625 CDCA7Q9BWT1 371 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 608.8 ms