RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 USP35Q9P2H5 1018 aa9.79□□□□□ -0.84
ATM-216ENST00000531525 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
ATM-216ENST00000531525 SPSB2Q99619 263 aa9.78□□□□□ -0.84
ATM-216ENST00000531525 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
ATM-216ENST00000531525 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
ATM-216ENST00000531525 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.84
ATM-216ENST00000531525 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.84
ATM-216ENST00000531525 POM121Q96HA1 1249 aa9.77□□□□□ -0.84
ATM-216ENST00000531525 ABCC8Q09428 1581 aa9.77□□□□□ -0.84
ATM-216ENST00000531525 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
ATM-216ENST00000531525 FDX1P10109 184 aa9.77□□□□□ -0.85
ATM-216ENST00000531525 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
ATM-216ENST00000531525 Q3C1V9 767 aa9.76□□□□□ -0.85
ATM-216ENST00000531525 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
ATM-216ENST00000531525 RSBN1LQ6PCB5 846 aaPredicted RBP9.76□□□□□ -0.85
ATM-216ENST00000531525 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
ATM-216ENST00000531525 CCDC88BA6NC98 1476 aa9.76□□□□□ -0.85
ATM-216ENST00000531525 PUS7Q96PZ0 661 aaKnown RBP9.75□□□□□ -0.85
ATM-216ENST00000531525 S1PR4O95977 384 aa9.74□□□□□ -0.85
ATM-216ENST00000531525 GJA5P36382 358 aa9.74□□□□□ -0.85
ATM-216ENST00000531525 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
ATM-216ENST00000531525 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.74□□□□□ -0.85
ATM-216ENST00000531525 SPTLC1O15269 473 aa9.73□□□□□ -0.85
ATM-216ENST00000531525 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
ATM-216ENST00000531525 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
ATM-216ENST00000531525 SLC6A16Q9GZN6 736 aa9.73□□□□□ -0.85
ATM-216ENST00000531525 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
ATM-216ENST00000531525 PRDM9Q9NQV7 894 aa9.72□□□□□ -0.85
ATM-216ENST00000531525 ATP1B4Q9UN42 357 aaPredicted RBP9.72□□□□□ -0.85
ATM-216ENST00000531525 AQRO60306 1485 aaKnown RBP eCLIP9.71□□□□□ -0.855e-9■□□□□ 8.2
ATM-216ENST00000531525 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
ATM-216ENST00000531525 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
ATM-216ENST00000531525 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
ATM-216ENST00000531525 PPEF1O14829 653 aaPredicted RBP9.7□□□□□ -0.86
ATM-216ENST00000531525 GGCXP38435 758 aa9.7□□□□□ -0.86
ATM-216ENST00000531525 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
ATM-216ENST00000531525 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
ATM-216ENST00000531525 CLK2P49760 499 aaKnown RBP9.68□□□□□ -0.86
ATM-216ENST00000531525 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
ATM-216ENST00000531525 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
ATM-216ENST00000531525 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
ATM-216ENST00000531525 POLR3EQ9NVU0 708 aa9.68□□□□□ -0.86
ATM-216ENST00000531525 MTMR2Q13614 643 aa9.67□□□□□ -0.86
ATM-216ENST00000531525 MMP16P51512 607 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 SKIV2LQ15477 1246 aaKnown RBP9.66□□□□□ -0.86
ATM-216ENST00000531525 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 RGS20O76081 388 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 QPCTQ16769 361 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
ATM-216ENST00000531525 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
ATM-216ENST00000531525 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
ATM-216ENST00000531525 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
ATM-216ENST00000531525 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
ATM-216ENST00000531525 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
ATM-216ENST00000531525 ZBTB3Q9H5J0 574 aa9.65□□□□□ -0.86
ATM-216ENST00000531525 RAD54L2Q9Y4B4 1467 aa9.64□□□□□ -0.87
ATM-216ENST00000531525 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
ATM-216ENST00000531525 LILRB3O75022 631 aa9.64□□□□□ -0.87
ATM-216ENST00000531525 PDE4CQ08493 712 aa9.64□□□□□ -0.87
ATM-216ENST00000531525 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
ATM-216ENST00000531525 MAGI1Q96QZ7 1491 aaPredicted RBP9.63□□□□□ -0.87
ATM-216ENST00000531525 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
ATM-216ENST00000531525 PROCA1Q8NCQ7 364 aaPredicted RBP9.63□□□□□ -0.87
ATM-216ENST00000531525 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
ATM-216ENST00000531525 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATM-216ENST00000531525 FCF1Q9Y324 198 aaKnown RBP9.63□□□□□ -0.87
ATM-216ENST00000531525 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
ATM-216ENST00000531525 JUNDP17535 347 aa9.62□□□□□ -0.87
ATM-216ENST00000531525 FBXO31Q5XUX0 539 aaPredicted RBP9.62□□□□□ -0.87
ATM-216ENST00000531525 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
ATM-216ENST00000531525 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
ATM-216ENST00000531525 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
ATM-216ENST00000531525 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
ATM-216ENST00000531525 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
ATM-216ENST00000531525 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
ATM-216ENST00000531525 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
ATM-216ENST00000531525 DESI1Q6ICB0 168 aa9.6□□□□□ -0.87
ATM-216ENST00000531525 TDRD9Q8NDG6 1382 aaKnown RBP9.6□□□□□ -0.87
ATM-216ENST00000531525 SOGA1O94964 1423 aa9.6□□□□□ -0.87
ATM-216ENST00000531525 SYNJ2O15056 1496 aa9.59□□□□□ -0.87
ATM-216ENST00000531525 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
ATM-216ENST00000531525 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
ATM-216ENST00000531525 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
ATM-216ENST00000531525 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
ATM-216ENST00000531525 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
ATM-216ENST00000531525 V9GY48 417 aaPredicted RBP9.59□□□□□ -0.87
ATM-216ENST00000531525 CUX1P39880 1505 aa9.58□□□□□ -0.88
ATM-216ENST00000531525 GRIN2BQ13224 1484 aa9.58□□□□□ -0.88
ATM-216ENST00000531525 KCNA1Q09470 495 aa9.58□□□□□ -0.88
ATM-216ENST00000531525 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
ATM-216ENST00000531525 SLC19A1P41440 591 aa9.56□□□□□ -0.88
ATM-216ENST00000531525 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
ATM-216ENST00000531525 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms