RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
PCF11-205ENST00000530906 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
PCF11-205ENST00000530906 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
PCF11-205ENST00000530906 TRIM52Q96A61 297 aa7.88□□□□□ -1.15
PCF11-205ENST00000530906 SIN3AQ96ST3 1273 aa7.88□□□□□ -1.15
PCF11-205ENST00000530906 ANKRD50Q9ULJ7 1429 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 ANKRD30BQ9BXX2 1392 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 ARID3CA6NKF2 412 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 GFRA3O60609 400 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 TSPY4P0CV99 314 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 TSPY10P0CW01 314 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
PCF11-205ENST00000530906 CHIC2Q9UKJ5 165 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
PCF11-205ENST00000530906 PLXNC1O60486 1568 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 MBD5Q9P267 1494 aa7.87□□□□□ -1.15
PCF11-205ENST00000530906 ZNF644Q9H582 1327 aaPredicted RBP7.86□□□□□ -1.15
PCF11-205ENST00000530906 SAMD9LQ8IVG5 1584 aa7.86□□□□□ -1.15
PCF11-205ENST00000530906 COPS2P61201 443 aa7.86□□□□□ -1.15
PCF11-205ENST00000530906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.86□□□□□ -1.15
PCF11-205ENST00000530906 PZPP20742 1482 aa7.86□□□□□ -1.15
PCF11-205ENST00000530906 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
PCF11-205ENST00000530906 TEX14Q8IWB6 1497 aa7.85□□□□□ -1.15
PCF11-205ENST00000530906 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
PCF11-205ENST00000530906 ARHGAP5Q13017 1502 aa7.84□□□□□ -1.15
PCF11-205ENST00000530906 ARHGEF12Q9NZN5 1544 aa7.84□□□□□ -1.15
PCF11-205ENST00000530906 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
PCF11-205ENST00000530906 UNC13BO14795 1591 aa7.84□□□□□ -1.15
PCF11-205ENST00000530906 KIF15Q9NS87 1388 aa7.84□□□□□ -1.16
PCF11-205ENST00000530906 ZPR1O75312 459 aa7.83□□□□□ -1.16
PCF11-205ENST00000530906 DNAJB2P25686 324 aa7.83□□□□□ -1.16
PCF11-205ENST00000530906 PLCH2O75038 1416 aa7.83□□□□□ -1.16
PCF11-205ENST00000530906 ERCC6L2Q5T890 1561 aa7.83□□□□□ -1.16
PCF11-205ENST00000530906 SLC4A3P48751 1232 aa7.82□□□□□ -1.16
PCF11-205ENST00000530906 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
PCF11-205ENST00000530906 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
PCF11-205ENST00000530906 DUOX2Q9NRD8 1548 aa7.82□□□□□ -1.16
PCF11-205ENST00000530906 ERBINQ96RT1 1412 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 NRG2O14511 850 aaPredicted RBP7.81□□□□□ -1.16
PCF11-205ENST00000530906 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 TRAF7Q6Q0C0 670 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 BLOC1S3Q6QNY0 202 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 RBM46Q8TBY0 533 aaKnown RBP7.81□□□□□ -1.16
PCF11-205ENST00000530906 TMUB1Q9BVT8 246 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 PRR14Q9BWN1 585 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 ABCC1P33527 1531 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 SYCP2Q9BX26 1530 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 MAGI2Q86UL8 1455 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 WDR7Q9Y4E6 1490 aa7.81□□□□□ -1.16
PCF11-205ENST00000530906 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
PCF11-205ENST00000530906 RTEL1-TNFRSF6BF6WH68 1400 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 NUTM2FA1L443 756 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 CCER2I3L3R5 266 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 EFCAB2Q5VUJ9 269 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 ABCA9Q8IUA7 1624 aa7.8□□□□□ -1.16
PCF11-205ENST00000530906 UHRF1BP1Q6BDS2 1440 aa7.79□□□□□ -1.16
PCF11-205ENST00000530906 IQGAP3Q86VI3 1631 aa7.79□□□□□ -1.16
PCF11-205ENST00000530906 SEMA3EO15041 775 aa7.79□□□□□ -1.16
PCF11-205ENST00000530906 GGCXP38435 758 aa7.79□□□□□ -1.16
PCF11-205ENST00000530906 EIF4G2P78344 907 aaKnown RBP eCLIP7.79□□□□□ -1.16
PCF11-205ENST00000530906 NUP155O75694 1391 aa7.79□□□□□ -1.16
PCF11-205ENST00000530906 FAM135AQ9P2D6 1515 aa7.78□□□□□ -1.16
PCF11-205ENST00000530906 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
PCF11-205ENST00000530906 EMID1Q96A84 441 aaPredicted RBP7.78□□□□□ -1.16
PCF11-205ENST00000530906 ATP10AO60312 1499 aa7.78□□□□□ -1.16
PCF11-205ENST00000530906 ARID4BQ4LE39 1312 aaPredicted RBP7.78□□□□□ -1.16
PCF11-205ENST00000530906 CFAP74Q9C0B2 1584 aa7.77□□□□□ -1.17
PCF11-205ENST00000530906 ACTN4O43707 911 aaKnown RBP7.77□□□□□ -1.17
PCF11-205ENST00000530906 RALGAPBQ86X10 1494 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 ANP32CO43423 234 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 FCHSD2O94868 740 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 SLC10A3P09131 477 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 HNRNPMP52272 730 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCF11-205ENST00000530906 PDZRN3Q9UPQ7 1066 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 SPATA31E1Q6ZUB1 1445 aa7.76□□□□□ -1.17
PCF11-205ENST00000530906 EIF2AK4Q9P2K8 1649 aaKnown RBP7.75□□□□□ -1.17
PCF11-205ENST00000530906 TLL1O43897 1013 aa7.75□□□□□ -1.17
PCF11-205ENST00000530906 CFHP08603 1231 aa7.75□□□□□ -1.17
PCF11-205ENST00000530906 PXYLP1Q8TE99 480 aa7.75□□□□□ -1.17
PCF11-205ENST00000530906 ZFYVE16Q7Z3T8 1539 aa7.74□□□□□ -1.17
PCF11-205ENST00000530906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.74□□□□□ -1.17
PCF11-205ENST00000530906 DDX10Q13206 875 aaKnown RBP7.74□□□□□ -1.17
PCF11-205ENST00000530906 TRIM67Q6ZTA4 783 aa7.74□□□□□ -1.17
PCF11-205ENST00000530906 INO80Q9ULG1 1556 aaPredicted RBP7.74□□□□□ -1.17
PCF11-205ENST00000530906 DEPDC5O75140 1603 aa7.74□□□□□ -1.17
PCF11-205ENST00000530906 LAMC1P11047 1609 aa7.74□□□□□ -1.17
PCF11-205ENST00000530906 NEURL4Q96JN8 1562 aa7.73□□□□□ -1.17
PCF11-205ENST00000530906 CCDC144AA2RUR9 1427 aa7.73□□□□□ -1.17
PCF11-205ENST00000530906 CNTLNQ9NXG0 1405 aa7.73□□□□□ -1.17
PCF11-205ENST00000530906 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
PCF11-205ENST00000530906 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
PCF11-205ENST00000530906 FANCAO15360 1455 aa7.73□□□□□ -1.17
PCF11-205ENST00000530906 ROCK2O75116 1388 aaKnown RBP7.72□□□□□ -1.17
PCF11-205ENST00000530906 SLC19A1P41440 591 aa7.72□□□□□ -1.17
PCF11-205ENST00000530906 ATP7AQ04656 1500 aa7.72□□□□□ -1.17
PCF11-205ENST00000530906 CCDC7Q96M83 1385 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms