RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-214ENST00000530141 EVX2Q03828 476 aa11.3□□□□□ -0.6
CMTM1-214ENST00000530141 EIF3AQ14152 1382 aaKnown RBP11.29□□□□□ -0.6
CMTM1-214ENST00000530141 PIK3R4Q99570 1358 aa11.29□□□□□ -0.6
CMTM1-214ENST00000530141 GLI3P10071 1580 aa11.29□□□□□ -0.6
CMTM1-214ENST00000530141 KIF1BO60333 1816 aa11.29□□□□□ -0.6
CMTM1-214ENST00000530141 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
CMTM1-214ENST00000530141 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-214ENST00000530141 C1orf167Q5SNV9 1468 aa11.28□□□□□ -0.6
CMTM1-214ENST00000530141 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
CMTM1-214ENST00000530141 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-214ENST00000530141 KIAA1210Q9ULL0 1709 aa11.27□□□□□ -0.61
CMTM1-214ENST00000530141 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-214ENST00000530141 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
CMTM1-214ENST00000530141 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
CMTM1-214ENST00000530141 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-214ENST00000530141 CDCA8Q53HL2 280 aa11.26□□□□□ -0.61
CMTM1-214ENST00000530141 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
CMTM1-214ENST00000530141 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
CMTM1-214ENST00000530141 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
CMTM1-214ENST00000530141 TMF1P82094 1093 aa11.24□□□□□ -0.61
CMTM1-214ENST00000530141 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
CMTM1-214ENST00000530141 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
CMTM1-214ENST00000530141 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
CMTM1-214ENST00000530141 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
CMTM1-214ENST00000530141 FNBP4Q8N3X1 1017 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-214ENST00000530141 NEXMIFQ5QGS0 1516 aa11.23□□□□□ -0.61
CMTM1-214ENST00000530141 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
CMTM1-214ENST00000530141 IFT172Q9UG01 1749 aa11.21□□□□□ -0.61
CMTM1-214ENST00000530141 PXDNQ92626 1479 aa11.21□□□□□ -0.61
CMTM1-214ENST00000530141 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
CMTM1-214ENST00000530141 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
CMTM1-214ENST00000530141 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
CMTM1-214ENST00000530141 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
CMTM1-214ENST00000530141 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
CMTM1-214ENST00000530141 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 ADGRF5Q8IZF2 1346 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 TESK2Q96S53 571 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 C14orf93Q9H972 538 aaKnown RBP11.18□□□□□ -0.62
CMTM1-214ENST00000530141 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
CMTM1-214ENST00000530141 PPLO60437 1756 aa11.17□□□□□ -0.62
CMTM1-214ENST00000530141 SLIT2O94813 1529 aa11.16□□□□□ -0.62
CMTM1-214ENST00000530141 RALBP1Q15311 655 aa11.16□□□□□ -0.62
CMTM1-214ENST00000530141 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
CMTM1-214ENST00000530141 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
CMTM1-214ENST00000530141 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-214ENST00000530141 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
CMTM1-214ENST00000530141 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.63
CMTM1-214ENST00000530141 FOXO3O43524 673 aa11.14□□□□□ -0.63
CMTM1-214ENST00000530141 ESCO1Q5FWF5 840 aa11.14□□□□□ -0.63
CMTM1-214ENST00000530141 FAM182BQ5T319 152 aa11.14□□□□□ -0.63
CMTM1-214ENST00000530141 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
CMTM1-214ENST00000530141 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-214ENST00000530141 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
CMTM1-214ENST00000530141 RGPD8O14715 1765 aaPredicted RBP11.13□□□□□ -0.63
CMTM1-214ENST00000530141 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
CMTM1-214ENST00000530141 R3HDM1Q15032 1099 aaKnown RBP11.13□□□□□ -0.63
CMTM1-214ENST00000530141 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
CMTM1-214ENST00000530141 A0A0G2JS52 829 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 MYT1Q01538 1121 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 UNC5CLQ8IV45 518 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
CMTM1-214ENST00000530141 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
CMTM1-214ENST00000530141 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
CMTM1-214ENST00000530141 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
CMTM1-214ENST00000530141 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-214ENST00000530141 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-214ENST00000530141 CAMTA1Q9Y6Y1 1673 aa11.11□□□□□ -0.63
CMTM1-214ENST00000530141 FMN2Q9NZ56 1722 aa11.1□□□□□ -0.63
CMTM1-214ENST00000530141 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
CMTM1-214ENST00000530141 ADGRB1O14514 1584 aa11.1□□□□□ -0.63
CMTM1-214ENST00000530141 MYBBP1AQ9BQG0 1328 aaKnown RBP11.09□□□□□ -0.63
CMTM1-214ENST00000530141 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
CMTM1-214ENST00000530141 PLEKHH1Q9ULM0 1364 aa11.09□□□□□ -0.63
CMTM1-214ENST00000530141 KRT27Q7Z3Y8 459 aa11.09□□□□□ -0.63
CMTM1-214ENST00000530141 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-214ENST00000530141 YY1P25490 414 aa11.08□□□□□ -0.64
CMTM1-214ENST00000530141 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
CMTM1-214ENST00000530141 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 GABBR2O75899 941 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 BAG6P46379 1132 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 PANK3Q9H999 370 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 KIF1AQ12756 1690 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
CMTM1-214ENST00000530141 PARD3Q8TEW0 1356 aa11.06□□□□□ -0.64
CMTM1-214ENST00000530141 CLCN6P51797 869 aa11.06□□□□□ -0.64
CMTM1-214ENST00000530141 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-214ENST00000530141 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms