RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
PPP1CA-206ENST00000529724 PPLO60437 1756 aa16.18■□□□□ 0.18
PPP1CA-206ENST00000529724 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
PPP1CA-206ENST00000529724 APLP2Q06481 763 aa16.18■□□□□ 0.18
PPP1CA-206ENST00000529724 PTGER2P43116 358 aa16.17■□□□□ 0.18
PPP1CA-206ENST00000529724 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
PPP1CA-206ENST00000529724 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
PPP1CA-206ENST00000529724 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
PPP1CA-206ENST00000529724 TRPM3Q9HCF6 1732 aaPredicted RBP16.15■□□□□ 0.18
PPP1CA-206ENST00000529724 IFT172Q9UG01 1749 aa16.15■□□□□ 0.18
PPP1CA-206ENST00000529724 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
PPP1CA-206ENST00000529724 SYT17Q9BSW7 474 aa16.14■□□□□ 0.17
PPP1CA-206ENST00000529724 ALS2Q96Q42 1657 aa16.14■□□□□ 0.17
PPP1CA-206ENST00000529724 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
PPP1CA-206ENST00000529724 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
PPP1CA-206ENST00000529724 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
PPP1CA-206ENST00000529724 FHDC1Q9C0D6 1143 aaPredicted RBP16.12■□□□□ 0.17
PPP1CA-206ENST00000529724 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
PPP1CA-206ENST00000529724 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
PPP1CA-206ENST00000529724 PDE3BQ13370 1112 aa16.1■□□□□ 0.17
PPP1CA-206ENST00000529724 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
PPP1CA-206ENST00000529724 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
PPP1CA-206ENST00000529724 RGPD3A6NKT7 1758 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-206ENST00000529724 RGPD4Q7Z3J3 1758 aa16.09■□□□□ 0.17
PPP1CA-206ENST00000529724 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
PPP1CA-206ENST00000529724 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
PPP1CA-206ENST00000529724 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-206ENST00000529724 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-206ENST00000529724 SGIP1Q9BQI5 828 aa16.07■□□□□ 0.16
PPP1CA-206ENST00000529724 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
PPP1CA-206ENST00000529724 DLC1Q96QB1 1528 aa16.06■□□□□ 0.16
PPP1CA-206ENST00000529724 ANKARQ7Z5J8 1434 aa16.06■□□□□ 0.16
PPP1CA-206ENST00000529724 CHRNA2Q15822 529 aa16.06■□□□□ 0.16
PPP1CA-206ENST00000529724 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
PPP1CA-206ENST00000529724 USP35Q9P2H5 1018 aa16.06■□□□□ 0.16
PPP1CA-206ENST00000529724 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
PPP1CA-206ENST00000529724 PLSCR1O15162 318 aa16.05■□□□□ 0.16
PPP1CA-206ENST00000529724 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
PPP1CA-206ENST00000529724 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
PPP1CA-206ENST00000529724 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
PPP1CA-206ENST00000529724 PROM2Q8N271 834 aa16.03■□□□□ 0.16
PPP1CA-206ENST00000529724 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
PPP1CA-206ENST00000529724 PIK3C2GO75747 1445 aa16.02■□□□□ 0.15
PPP1CA-206ENST00000529724 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
PPP1CA-206ENST00000529724 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
PPP1CA-206ENST00000529724 GOLGB1Q14789 3259 aaKnown RBP16.01■□□□□ 0.15
PPP1CA-206ENST00000529724 ITGAEP38570 1179 aa16■□□□□ 0.15
PPP1CA-206ENST00000529724 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
PPP1CA-206ENST00000529724 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
PPP1CA-206ENST00000529724 BCL11BQ9C0K0 894 aaPredicted RBP16■□□□□ 0.15
PPP1CA-206ENST00000529724 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 SBF2Q86WG5 1849 aa15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 PHRF1Q9P1Y6 1649 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 OVOS2A0A0G2JMS6 1433 aa15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
PPP1CA-206ENST00000529724 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
PPP1CA-206ENST00000529724 C11orf95C9JLR9 678 aaPredicted RBP15.98■□□□□ 0.15
PPP1CA-206ENST00000529724 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
PPP1CA-206ENST00000529724 SAFB2Q14151 953 aaKnown RBP eCLIP15.98■□□□□ 0.15
PPP1CA-206ENST00000529724 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
PPP1CA-206ENST00000529724 PRAM1Q96QH2 718 aa15.97■□□□□ 0.15
PPP1CA-206ENST00000529724 ARXQ96QS3 562 aa15.97■□□□□ 0.15
PPP1CA-206ENST00000529724 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
PPP1CA-206ENST00000529724 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
PPP1CA-206ENST00000529724 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
PPP1CA-206ENST00000529724 GPR162Q16538 588 aa15.96■□□□□ 0.15
PPP1CA-206ENST00000529724 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
PPP1CA-206ENST00000529724 EVA1CP58658 441 aa15.95■□□□□ 0.14
PPP1CA-206ENST00000529724 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
PPP1CA-206ENST00000529724 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
PPP1CA-206ENST00000529724 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
PPP1CA-206ENST00000529724 HSPA6P17066 643 aa15.94■□□□□ 0.14
PPP1CA-206ENST00000529724 ATP7BP35670 1465 aa15.94■□□□□ 0.14
PPP1CA-206ENST00000529724 RGL3Q3MIN7 710 aa15.93■□□□□ 0.14
PPP1CA-206ENST00000529724 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
PPP1CA-206ENST00000529724 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
PPP1CA-206ENST00000529724 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
PPP1CA-206ENST00000529724 TULP4Q9NRJ4 1543 aa15.92■□□□□ 0.14
PPP1CA-206ENST00000529724 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
PPP1CA-206ENST00000529724 BCL9O00512 1426 aa15.89■□□□□ 0.13
PPP1CA-206ENST00000529724 HIRIP3Q9BW71 556 aaPredicted RBP15.89■□□□□ 0.13
PPP1CA-206ENST00000529724 COL5A2P05997 1499 aaPredicted RBP15.89■□□□□ 0.13
PPP1CA-206ENST00000529724 CPDO75976 1380 aa15.88■□□□□ 0.13
PPP1CA-206ENST00000529724 ATP10DQ9P241 1426 aa15.88■□□□□ 0.13
PPP1CA-206ENST00000529724 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
PPP1CA-206ENST00000529724 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
PPP1CA-206ENST00000529724 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-206ENST00000529724 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
PPP1CA-206ENST00000529724 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-206ENST00000529724 POGKQ9P215 609 aa15.87■□□□□ 0.13
PPP1CA-206ENST00000529724 CRB1P82279 1406 aa15.86■□□□□ 0.13
PPP1CA-206ENST00000529724 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
PPP1CA-206ENST00000529724 MARCH10Q8NA82 808 aaPredicted RBP15.86■□□□□ 0.13
PPP1CA-206ENST00000529724 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
PPP1CA-206ENST00000529724 DDB1Q16531 1140 aa15.85■□□□□ 0.13
PPP1CA-206ENST00000529724 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-206ENST00000529724 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-206ENST00000529724 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.129e-9■■■■□ 19.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms