RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 COL9A1P20849 921 aa10.33□□□□□ -0.76
PTPN22-208ENST00000529045 FLIIQ13045 1269 aa10.33□□□□□ -0.76
PTPN22-208ENST00000529045 CDCA7LQ96GN5 454 aa10.33□□□□□ -0.76
PTPN22-208ENST00000529045 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
PTPN22-208ENST00000529045 MAGI2Q86UL8 1455 aa10.33□□□□□ -0.76
PTPN22-208ENST00000529045 CCNB3Q8WWL7 1395 aa10.32□□□□□ -0.76
PTPN22-208ENST00000529045 NEFLP07196 543 aa10.32□□□□□ -0.76
PTPN22-208ENST00000529045 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
PTPN22-208ENST00000529045 ZFYVE16Q7Z3T8 1539 aa10.32□□□□□ -0.76
PTPN22-208ENST00000529045 FHOD3Q2V2M9 1422 aa10.32□□□□□ -0.76
PTPN22-208ENST00000529045 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
PTPN22-208ENST00000529045 PROCA1Q8NCQ7 364 aaPredicted RBP10.31□□□□□ -0.76
PTPN22-208ENST00000529045 LTBP4Q8N2S1 1624 aa10.31□□□□□ -0.76
PTPN22-208ENST00000529045 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
PTPN22-208ENST00000529045 ARHGEF12Q9NZN5 1544 aa10.3□□□□□ -0.76
PTPN22-208ENST00000529045 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
PTPN22-208ENST00000529045 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
PTPN22-208ENST00000529045 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
PTPN22-208ENST00000529045 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
PTPN22-208ENST00000529045 MCM6Q14566 821 aa10.29□□□□□ -0.76
PTPN22-208ENST00000529045 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
PTPN22-208ENST00000529045 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
PTPN22-208ENST00000529045 SIGLEC1Q9BZZ2 1709 aa10.28□□□□□ -0.76
PTPN22-208ENST00000529045 ERICH6BQ5W0A0 696 aa10.28□□□□□ -0.76
PTPN22-208ENST00000529045 RBM46Q8TBY0 533 aaKnown RBP10.28□□□□□ -0.76
PTPN22-208ENST00000529045 EYA1Q99502 592 aa10.28□□□□□ -0.76
PTPN22-208ENST00000529045 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTPN22-208ENST00000529045 TSKSQ9UJT2 592 aa10.28□□□□□ -0.76
PTPN22-208ENST00000529045 FANCIQ9NVI1 1328 aa10.28□□□□□ -0.76
PTPN22-208ENST00000529045 PTPN5P54829 565 aa10.27□□□□□ -0.77
PTPN22-208ENST00000529045 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
PTPN22-208ENST00000529045 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
PTPN22-208ENST00000529045 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
PTPN22-208ENST00000529045 FBXO31Q5XUX0 539 aaPredicted RBP10.26□□□□□ -0.77
PTPN22-208ENST00000529045 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
PTPN22-208ENST00000529045 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
PTPN22-208ENST00000529045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
PTPN22-208ENST00000529045 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
PTPN22-208ENST00000529045 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
PTPN22-208ENST00000529045 TBC1D2Q9BYX2 928 aa10.25□□□□□ -0.77
PTPN22-208ENST00000529045 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
PTPN22-208ENST00000529045 ATP10BO94823 1461 aa10.24□□□□□ -0.77
PTPN22-208ENST00000529045 WNT2BQ93097 391 aa10.24□□□□□ -0.77
PTPN22-208ENST00000529045 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
PTPN22-208ENST00000529045 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
PTPN22-208ENST00000529045 TIAM1Q13009 1591 aa10.23□□□□□ -0.77
PTPN22-208ENST00000529045 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
PTPN22-208ENST00000529045 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
PTPN22-208ENST00000529045 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
PTPN22-208ENST00000529045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPN22-208ENST00000529045 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 A6NJR5 290 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 CD46P15529 392 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 RABGEF1Q9UJ41 708 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 RAB3GAP2Q9H2M9 1393 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
PTPN22-208ENST00000529045 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
PTPN22-208ENST00000529045 NUDT18Q6ZVK8 323 aa10.21□□□□□ -0.77
PTPN22-208ENST00000529045 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.77
PTPN22-208ENST00000529045 C9orf84Q5VXU9 1444 aa10.21□□□□□ -0.78
PTPN22-208ENST00000529045 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
PTPN22-208ENST00000529045 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
PTPN22-208ENST00000529045 C3P01024 1663 aa10.19□□□□□ -0.78
PTPN22-208ENST00000529045 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
PTPN22-208ENST00000529045 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
PTPN22-208ENST00000529045 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
PTPN22-208ENST00000529045 SPIRE2Q8WWL2 714 aa10.19□□□□□ -0.78
PTPN22-208ENST00000529045 ATP10AO60312 1499 aa10.18□□□□□ -0.78
PTPN22-208ENST00000529045 ANP32CO43423 234 aa10.18□□□□□ -0.78
PTPN22-208ENST00000529045 TRAK2O60296 914 aa10.18□□□□□ -0.78
PTPN22-208ENST00000529045 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
PTPN22-208ENST00000529045 TATDN2Q93075 761 aa10.18□□□□□ -0.78
PTPN22-208ENST00000529045 POM121Q96HA1 1249 aa10.18□□□□□ -0.78
PTPN22-208ENST00000529045 APBB1O00213 710 aa10.17□□□□□ -0.78
PTPN22-208ENST00000529045 DNAJB2P25686 324 aa10.17□□□□□ -0.78
PTPN22-208ENST00000529045 TMEM134Q9H6X4 195 aa10.17□□□□□ -0.78
PTPN22-208ENST00000529045 SEPT9Q9UHD8 586 aaPredicted RBP10.17□□□□□ -0.78
PTPN22-208ENST00000529045 PNMA3Q9UL41 463 aa10.17□□□□□ -0.78
PTPN22-208ENST00000529045 SAMD9Q5K651 1589 aa10.17□□□□□ -0.78
PTPN22-208ENST00000529045 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
PTPN22-208ENST00000529045 RFC5P40937 340 aa10.16□□□□□ -0.78
PTPN22-208ENST00000529045 ARID3AQ99856 593 aa10.16□□□□□ -0.78
PTPN22-208ENST00000529045 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
PTPN22-208ENST00000529045 LRRC9Q6ZRR7 1453 aa10.15□□□□□ -0.78
PTPN22-208ENST00000529045 MROH2AA6NES4 1674 aa10.15□□□□□ -0.79
PTPN22-208ENST00000529045 ZNF142P52746 1687 aaPredicted RBP10.15□□□□□ -0.79
PTPN22-208ENST00000529045 AGLP35573 1532 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPN22-208ENST00000529045 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 SMAPO00193 183 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 BCAMP50895 628 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
PTPN22-208ENST00000529045 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
PTPN22-208ENST00000529045 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
PTPN22-208ENST00000529045 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
PTPN22-208ENST00000529045 SUPT6HQ7KZ85 1726 aaKnown RBP10.13□□□□□ -0.79
PTPN22-208ENST00000529045 PLA2R1Q13018 1463 aa10.13□□□□□ -0.79
PTPN22-208ENST00000529045 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
PTPN22-208ENST00000529045 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms